Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18947 | 57064;57065;57066 | chr2:178598871;178598870;178598869 | chr2:179463598;179463597;179463596 |
N2AB | 17306 | 52141;52142;52143 | chr2:178598871;178598870;178598869 | chr2:179463598;179463597;179463596 |
N2A | 16379 | 49360;49361;49362 | chr2:178598871;178598870;178598869 | chr2:179463598;179463597;179463596 |
N2B | 9882 | 29869;29870;29871 | chr2:178598871;178598870;178598869 | chr2:179463598;179463597;179463596 |
Novex-1 | 10007 | 30244;30245;30246 | chr2:178598871;178598870;178598869 | chr2:179463598;179463597;179463596 |
Novex-2 | 10074 | 30445;30446;30447 | chr2:178598871;178598870;178598869 | chr2:179463598;179463597;179463596 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs1357569723 | -0.932 | 0.625 | N | 0.558 | 0.2 | 0.19670166235 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1942 | likely_benign | 0.1507 | benign | -0.685 | Destabilizing | 0.625 | D | 0.558 | neutral | N | 0.510248894 | None | None | N |
S/C | 0.245 | likely_benign | 0.2035 | benign | -0.452 | Destabilizing | 0.997 | D | 0.595 | neutral | N | 0.482390057 | None | None | N |
S/D | 0.9008 | likely_pathogenic | 0.8062 | pathogenic | 0.126 | Stabilizing | 0.728 | D | 0.557 | neutral | None | None | None | None | N |
S/E | 0.9164 | likely_pathogenic | 0.8323 | pathogenic | 0.151 | Stabilizing | 0.842 | D | 0.57 | neutral | None | None | None | None | N |
S/F | 0.6939 | likely_pathogenic | 0.5369 | ambiguous | -1.003 | Destabilizing | 0.028 | N | 0.511 | neutral | N | 0.517849657 | None | None | N |
S/G | 0.272 | likely_benign | 0.2112 | benign | -0.928 | Destabilizing | 0.688 | D | 0.529 | neutral | None | None | None | None | N |
S/H | 0.7775 | likely_pathogenic | 0.6378 | pathogenic | -1.236 | Destabilizing | 0.974 | D | 0.596 | neutral | None | None | None | None | N |
S/I | 0.6581 | likely_pathogenic | 0.4849 | ambiguous | -0.142 | Destabilizing | 0.904 | D | 0.595 | neutral | None | None | None | None | N |
S/K | 0.9754 | likely_pathogenic | 0.9391 | pathogenic | -0.339 | Destabilizing | 0.842 | D | 0.569 | neutral | None | None | None | None | N |
S/L | 0.4826 | ambiguous | 0.3345 | benign | -0.142 | Destabilizing | 0.728 | D | 0.573 | neutral | None | None | None | None | N |
S/M | 0.5606 | ambiguous | 0.4143 | ambiguous | -0.155 | Destabilizing | 0.993 | D | 0.589 | neutral | None | None | None | None | N |
S/N | 0.4491 | ambiguous | 0.3305 | benign | -0.438 | Destabilizing | 0.067 | N | 0.31 | neutral | None | None | None | None | N |
S/P | 0.9131 | likely_pathogenic | 0.8644 | pathogenic | -0.29 | Destabilizing | 0.989 | D | 0.588 | neutral | N | 0.517849657 | None | None | N |
S/Q | 0.8371 | likely_pathogenic | 0.7371 | pathogenic | -0.456 | Destabilizing | 0.974 | D | 0.561 | neutral | None | None | None | None | N |
S/R | 0.9519 | likely_pathogenic | 0.8998 | pathogenic | -0.3 | Destabilizing | 0.974 | D | 0.581 | neutral | None | None | None | None | N |
S/T | 0.2037 | likely_benign | 0.1384 | benign | -0.438 | Destabilizing | 0.801 | D | 0.563 | neutral | N | 0.46443646 | None | None | N |
S/V | 0.6037 | likely_pathogenic | 0.4302 | ambiguous | -0.29 | Destabilizing | 0.842 | D | 0.569 | neutral | None | None | None | None | N |
S/W | 0.7786 | likely_pathogenic | 0.666 | pathogenic | -1.039 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
S/Y | 0.6193 | likely_pathogenic | 0.4621 | ambiguous | -0.709 | Destabilizing | 0.111 | N | 0.515 | neutral | N | 0.514521351 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.