Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18951 | 57076;57077;57078 | chr2:178598859;178598858;178598857 | chr2:179463586;179463585;179463584 |
N2AB | 17310 | 52153;52154;52155 | chr2:178598859;178598858;178598857 | chr2:179463586;179463585;179463584 |
N2A | 16383 | 49372;49373;49374 | chr2:178598859;178598858;178598857 | chr2:179463586;179463585;179463584 |
N2B | 9886 | 29881;29882;29883 | chr2:178598859;178598858;178598857 | chr2:179463586;179463585;179463584 |
Novex-1 | 10011 | 30256;30257;30258 | chr2:178598859;178598858;178598857 | chr2:179463586;179463585;179463584 |
Novex-2 | 10078 | 30457;30458;30459 | chr2:178598859;178598858;178598857 | chr2:179463586;179463585;179463584 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | N | 0.799 | 0.453 | 0.432604763906 | gnomAD-4.0.0 | 1.36877E-06 | None | None | None | None | N | None | 2.99061E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99643E-07 | 0 | 0 |
T/N | rs2052524114 | None | 0.993 | N | 0.645 | 0.311 | 0.369309618794 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs2052524114 | None | 0.993 | N | 0.645 | 0.311 | 0.369309618794 | gnomAD-4.0.0 | 1.85971E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.5434E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.111 | likely_benign | 0.1102 | benign | -0.614 | Destabilizing | 0.898 | D | 0.471 | neutral | N | 0.516636149 | None | None | N |
T/C | 0.4926 | ambiguous | 0.4966 | ambiguous | -0.382 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/D | 0.4018 | ambiguous | 0.4072 | ambiguous | 0.109 | Stabilizing | 0.995 | D | 0.749 | deleterious | None | None | None | None | N |
T/E | 0.385 | ambiguous | 0.3803 | ambiguous | 0.059 | Stabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/F | 0.3784 | ambiguous | 0.359 | ambiguous | -0.946 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
T/G | 0.2374 | likely_benign | 0.2249 | benign | -0.794 | Destabilizing | 0.966 | D | 0.655 | neutral | None | None | None | None | N |
T/H | 0.3652 | ambiguous | 0.3302 | benign | -1.027 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/I | 0.2987 | likely_benign | 0.3026 | benign | -0.247 | Destabilizing | 0.997 | D | 0.799 | deleterious | N | 0.480375368 | None | None | N |
T/K | 0.3808 | ambiguous | 0.3535 | ambiguous | -0.551 | Destabilizing | 0.995 | D | 0.75 | deleterious | None | None | None | None | N |
T/L | 0.1494 | likely_benign | 0.1438 | benign | -0.247 | Destabilizing | 0.983 | D | 0.665 | neutral | None | None | None | None | N |
T/M | 0.1137 | likely_benign | 0.1226 | benign | -0.022 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/N | 0.125 | likely_benign | 0.1359 | benign | -0.373 | Destabilizing | 0.993 | D | 0.645 | neutral | N | 0.472168933 | None | None | N |
T/P | 0.1485 | likely_benign | 0.122 | benign | -0.339 | Destabilizing | 0.997 | D | 0.797 | deleterious | N | 0.521945968 | None | None | N |
T/Q | 0.2972 | likely_benign | 0.2748 | benign | -0.579 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
T/R | 0.3907 | ambiguous | 0.3381 | benign | -0.251 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
T/S | 0.1007 | likely_benign | 0.1056 | benign | -0.639 | Destabilizing | 0.362 | N | 0.34 | neutral | N | 0.46732205 | None | None | N |
T/V | 0.2117 | likely_benign | 0.2115 | benign | -0.339 | Destabilizing | 0.983 | D | 0.551 | neutral | None | None | None | None | N |
T/W | 0.7222 | likely_pathogenic | 0.6995 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
T/Y | 0.4352 | ambiguous | 0.4128 | ambiguous | -0.65 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.