Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18999 | 57220;57221;57222 | chr2:178598622;178598621;178598620 | chr2:179463349;179463348;179463347 |
N2AB | 17358 | 52297;52298;52299 | chr2:178598622;178598621;178598620 | chr2:179463349;179463348;179463347 |
N2A | 16431 | 49516;49517;49518 | chr2:178598622;178598621;178598620 | chr2:179463349;179463348;179463347 |
N2B | 9934 | 30025;30026;30027 | chr2:178598622;178598621;178598620 | chr2:179463349;179463348;179463347 |
Novex-1 | 10059 | 30400;30401;30402 | chr2:178598622;178598621;178598620 | chr2:179463349;179463348;179463347 |
Novex-2 | 10126 | 30601;30602;30603 | chr2:178598622;178598621;178598620 | chr2:179463349;179463348;179463347 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs2052422100 | None | 1.0 | N | 0.643 | 0.481 | 0.415438038341 | gnomAD-4.0.0 | 6.88008E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0105E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8632 | likely_pathogenic | 0.9054 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.500298473 | None | None | N |
D/C | 0.9835 | likely_pathogenic | 0.9887 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
D/E | 0.7875 | likely_pathogenic | 0.8219 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.389 | neutral | N | 0.467473978 | None | None | N |
D/F | 0.9812 | likely_pathogenic | 0.9873 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
D/G | 0.8148 | likely_pathogenic | 0.8603 | pathogenic | -0.781 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.47450911 | None | None | N |
D/H | 0.945 | likely_pathogenic | 0.9618 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.482297471 | None | None | N |
D/I | 0.9782 | likely_pathogenic | 0.9855 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/K | 0.978 | likely_pathogenic | 0.9821 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
D/L | 0.9583 | likely_pathogenic | 0.9699 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
D/M | 0.9884 | likely_pathogenic | 0.992 | pathogenic | 0.556 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
D/N | 0.5206 | ambiguous | 0.5737 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.508301881 | None | None | N |
D/P | 0.9975 | likely_pathogenic | 0.9988 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
D/Q | 0.9622 | likely_pathogenic | 0.9689 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/R | 0.97 | likely_pathogenic | 0.975 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/S | 0.6859 | likely_pathogenic | 0.755 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
D/T | 0.9258 | likely_pathogenic | 0.9501 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
D/V | 0.9329 | likely_pathogenic | 0.9544 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.747 | deleterious | N | 0.486625884 | None | None | N |
D/W | 0.9964 | likely_pathogenic | 0.9978 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
D/Y | 0.8978 | likely_pathogenic | 0.9273 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.663 | neutral | N | 0.502870488 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.