Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1901357262;57263;57264 chr2:178598580;178598579;178598578chr2:179463307;179463306;179463305
N2AB1737252339;52340;52341 chr2:178598580;178598579;178598578chr2:179463307;179463306;179463305
N2A1644549558;49559;49560 chr2:178598580;178598579;178598578chr2:179463307;179463306;179463305
N2B994830067;30068;30069 chr2:178598580;178598579;178598578chr2:179463307;179463306;179463305
Novex-11007330442;30443;30444 chr2:178598580;178598579;178598578chr2:179463307;179463306;179463305
Novex-21014030643;30644;30645 chr2:178598580;178598579;178598578chr2:179463307;179463306;179463305
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-26
  • Domain position: 26
  • Structural Position: 28
  • Q(SASA): 0.7209
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs991075111 None 0.896 N 0.291 0.201 0.589813230912 gnomAD-4.0.0 3.43309E-06 None None None None I None 0 0 None 0 0 None 0 0 4.50202E-06 0 0
L/V None -0.141 0.002 N 0.103 0.065 0.115124310173 gnomAD-2.1.1 4.11E-06 None None None None I None 0 0 None 1.00766E-04 0 None 0 None 0 0 0
L/V None -0.141 0.002 N 0.103 0.065 0.115124310173 gnomAD-4.0.0 2.05983E-06 None None None None I None 0 0 None 7.6864E-05 0 None 0 0 0 0 1.66168E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1442 likely_benign 0.1597 benign -0.617 Destabilizing 0.25 N 0.296 neutral None None None None I
L/C 0.5157 ambiguous 0.5159 ambiguous -0.792 Destabilizing 0.977 D 0.235 neutral None None None None I
L/D 0.5654 likely_pathogenic 0.5886 pathogenic -0.104 Destabilizing 0.85 D 0.285 neutral None None None None I
L/E 0.2849 likely_benign 0.2728 benign -0.158 Destabilizing 0.617 D 0.327 neutral None None None None I
L/F 0.1534 likely_benign 0.1651 benign -0.502 Destabilizing 0.85 D 0.265 neutral None None None None I
L/G 0.3669 ambiguous 0.401 ambiguous -0.787 Destabilizing 0.447 N 0.299 neutral None None None None I
L/H 0.2603 likely_benign 0.2511 benign 0.063 Stabilizing 0.992 D 0.221 neutral None None None None I
L/I 0.0824 likely_benign 0.0867 benign -0.274 Destabilizing 0.08 N 0.29 neutral N 0.479173839 None None I
L/K 0.2747 likely_benign 0.2348 benign -0.367 Destabilizing 0.021 N 0.253 neutral None None None None I
L/M 0.0978 likely_benign 0.1099 benign -0.604 Destabilizing 0.85 D 0.289 neutral None None None None I
L/N 0.2633 likely_benign 0.3055 benign -0.29 Destabilizing 0.85 D 0.279 neutral None None None None I
L/P 0.2159 likely_benign 0.213 benign -0.358 Destabilizing 0.896 D 0.291 neutral N 0.473399873 None None I
L/Q 0.1316 likely_benign 0.1277 benign -0.429 Destabilizing 0.81 D 0.297 neutral N 0.486387813 None None I
L/R 0.266 likely_benign 0.2199 benign 0.113 Stabilizing 0.681 D 0.284 neutral N 0.475016026 None None I
L/S 0.1724 likely_benign 0.1864 benign -0.754 Destabilizing 0.021 N 0.241 neutral None None None None I
L/T 0.163 likely_benign 0.1801 benign -0.696 Destabilizing 0.021 N 0.179 neutral None None None None I
L/V 0.0767 likely_benign 0.0857 benign -0.358 Destabilizing 0.002 N 0.103 neutral N 0.467071334 None None I
L/W 0.3097 likely_benign 0.2738 benign -0.515 Destabilizing 0.992 D 0.295 neutral None None None None I
L/Y 0.3363 likely_benign 0.3551 ambiguous -0.289 Destabilizing 0.92 D 0.254 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.