Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19030 | 57313;57314;57315 | chr2:178598529;178598528;178598527 | chr2:179463256;179463255;179463254 |
N2AB | 17389 | 52390;52391;52392 | chr2:178598529;178598528;178598527 | chr2:179463256;179463255;179463254 |
N2A | 16462 | 49609;49610;49611 | chr2:178598529;178598528;178598527 | chr2:179463256;179463255;179463254 |
N2B | 9965 | 30118;30119;30120 | chr2:178598529;178598528;178598527 | chr2:179463256;179463255;179463254 |
Novex-1 | 10090 | 30493;30494;30495 | chr2:178598529;178598528;178598527 | chr2:179463256;179463255;179463254 |
Novex-2 | 10157 | 30694;30695;30696 | chr2:178598529;178598528;178598527 | chr2:179463256;179463255;179463254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1402903802 | -0.779 | 0.997 | N | 0.43 | 0.127 | 0.336892272479 | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.46E-05 | None | 0 | 1.79E-05 | 0 |
E/D | rs1402903802 | -0.779 | 0.997 | N | 0.43 | 0.127 | 0.336892272479 | gnomAD-4.0.0 | 6.42224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86875E-06 | 4.41826E-05 | 0 |
E/G | None | None | 0.999 | N | 0.587 | 0.199 | 0.482209950775 | gnomAD-4.0.0 | 6.86858E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00559E-07 | 0 | 0 |
E/K | rs966403005 | None | 0.997 | N | 0.473 | 0.298 | 0.413241256734 | gnomAD-4.0.0 | 2.74775E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60223E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1027 | likely_benign | 0.1071 | benign | -0.658 | Destabilizing | 0.953 | D | 0.464 | neutral | N | 0.466359257 | None | None | N |
E/C | 0.8331 | likely_pathogenic | 0.8325 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/D | 0.1531 | likely_benign | 0.1539 | benign | -0.881 | Destabilizing | 0.997 | D | 0.43 | neutral | N | 0.492295065 | None | None | N |
E/F | 0.694 | likely_pathogenic | 0.7176 | pathogenic | 0.112 | Stabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/G | 0.1926 | likely_benign | 0.1947 | benign | -1.01 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.478155119 | None | None | N |
E/H | 0.5655 | likely_pathogenic | 0.57 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.456 | neutral | None | None | None | None | N |
E/I | 0.197 | likely_benign | 0.205 | benign | 0.298 | Stabilizing | 0.469 | N | 0.476 | neutral | None | None | None | None | N |
E/K | 0.2001 | likely_benign | 0.1968 | benign | -0.39 | Destabilizing | 0.997 | D | 0.473 | neutral | N | 0.450581728 | None | None | N |
E/L | 0.2793 | likely_benign | 0.301 | benign | 0.298 | Stabilizing | 0.931 | D | 0.573 | neutral | None | None | None | None | N |
E/M | 0.3305 | likely_benign | 0.3373 | benign | 0.483 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
E/N | 0.2676 | likely_benign | 0.2765 | benign | -1.011 | Destabilizing | 0.999 | D | 0.463 | neutral | None | None | None | None | N |
E/P | 0.5557 | ambiguous | 0.5889 | pathogenic | None | Stabilizing | 0.999 | D | 0.522 | neutral | None | None | None | None | N |
E/Q | 0.1769 | likely_benign | 0.1825 | benign | -0.854 | Destabilizing | 0.999 | D | 0.474 | neutral | N | 0.470141017 | None | None | N |
E/R | 0.3562 | ambiguous | 0.3525 | ambiguous | 0.021 | Stabilizing | 0.999 | D | 0.463 | neutral | None | None | None | None | N |
E/S | 0.21 | likely_benign | 0.2151 | benign | -1.257 | Destabilizing | 0.993 | D | 0.439 | neutral | None | None | None | None | N |
E/T | 0.1885 | likely_benign | 0.2026 | benign | -0.955 | Destabilizing | 0.985 | D | 0.511 | neutral | None | None | None | None | N |
E/V | 0.1237 | likely_benign | 0.1252 | benign | None | Stabilizing | 0.219 | N | 0.397 | neutral | N | 0.463145594 | None | None | N |
E/W | 0.8948 | likely_pathogenic | 0.902 | pathogenic | 0.422 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/Y | 0.5824 | likely_pathogenic | 0.5973 | pathogenic | 0.38 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.