Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19034 | 57325;57326;57327 | chr2:178598517;178598516;178598515 | chr2:179463244;179463243;179463242 |
N2AB | 17393 | 52402;52403;52404 | chr2:178598517;178598516;178598515 | chr2:179463244;179463243;179463242 |
N2A | 16466 | 49621;49622;49623 | chr2:178598517;178598516;178598515 | chr2:179463244;179463243;179463242 |
N2B | 9969 | 30130;30131;30132 | chr2:178598517;178598516;178598515 | chr2:179463244;179463243;179463242 |
Novex-1 | 10094 | 30505;30506;30507 | chr2:178598517;178598516;178598515 | chr2:179463244;179463243;179463242 |
Novex-2 | 10161 | 30706;30707;30708 | chr2:178598517;178598516;178598515 | chr2:179463244;179463243;179463242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.583 | 0.288 | 0.429320821379 | gnomAD-4.0.0 | 2.06382E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.58466E-05 | 0 |
E/K | rs1021198349 | None | 0.999 | N | 0.632 | 0.329 | 0.382925413656 | gnomAD-4.0.0 | 1.61298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87417E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0851 | likely_benign | 0.106 | benign | -0.33 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.459299999 | None | None | N |
E/C | 0.5656 | likely_pathogenic | 0.6635 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/D | 0.0834 | likely_benign | 0.0921 | benign | -0.227 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.419472175 | None | None | N |
E/F | 0.446 | ambiguous | 0.5248 | ambiguous | -0.157 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/G | 0.0973 | likely_benign | 0.1095 | benign | -0.511 | Destabilizing | 1.0 | D | 0.588 | neutral | N | 0.456817054 | None | None | N |
E/H | 0.2916 | likely_benign | 0.3587 | ambiguous | 0.306 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/I | 0.1288 | likely_benign | 0.1636 | benign | 0.113 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/K | 0.1062 | likely_benign | 0.1308 | benign | 0.024 | Stabilizing | 0.999 | D | 0.632 | neutral | N | 0.418549455 | None | None | N |
E/L | 0.1837 | likely_benign | 0.2379 | benign | 0.113 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/M | 0.2219 | likely_benign | 0.2712 | benign | -0.065 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/N | 0.1171 | likely_benign | 0.1493 | benign | -0.172 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/P | 0.4152 | ambiguous | 0.4909 | ambiguous | -0.016 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
E/Q | 0.1104 | likely_benign | 0.1316 | benign | -0.135 | Destabilizing | 1.0 | D | 0.531 | neutral | N | 0.465860612 | None | None | N |
E/R | 0.2029 | likely_benign | 0.242 | benign | 0.394 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
E/S | 0.1209 | likely_benign | 0.148 | benign | -0.397 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
E/T | 0.0996 | likely_benign | 0.1252 | benign | -0.25 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
E/V | 0.0898 | likely_benign | 0.1101 | benign | -0.016 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.474981528 | None | None | N |
E/W | 0.6875 | likely_pathogenic | 0.7612 | pathogenic | -0.022 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/Y | 0.3632 | ambiguous | 0.4379 | ambiguous | 0.068 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.