Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19047 | 57364;57365;57366 | chr2:178598031;178598030;178598029 | chr2:179462758;179462757;179462756 |
N2AB | 17406 | 52441;52442;52443 | chr2:178598031;178598030;178598029 | chr2:179462758;179462757;179462756 |
N2A | 16479 | 49660;49661;49662 | chr2:178598031;178598030;178598029 | chr2:179462758;179462757;179462756 |
N2B | 9982 | 30169;30170;30171 | chr2:178598031;178598030;178598029 | chr2:179462758;179462757;179462756 |
Novex-1 | 10107 | 30544;30545;30546 | chr2:178598031;178598030;178598029 | chr2:179462758;179462757;179462756 |
Novex-2 | 10174 | 30745;30746;30747 | chr2:178598031;178598030;178598029 | chr2:179462758;179462757;179462756 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs758155786 | -0.529 | 1.0 | N | 0.746 | 0.304 | 0.141422826196 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs758155786 | -0.529 | 1.0 | N | 0.746 | 0.304 | 0.141422826196 | gnomAD-4.0.0 | 1.59283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86036E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7003 | likely_pathogenic | 0.6152 | pathogenic | -0.445 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/C | 0.7836 | likely_pathogenic | 0.7331 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/D | 0.9121 | likely_pathogenic | 0.8571 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
K/E | 0.5765 | likely_pathogenic | 0.4357 | ambiguous | 0.037 | Stabilizing | 0.999 | D | 0.586 | neutral | N | 0.420392107 | None | None | N |
K/F | 0.9268 | likely_pathogenic | 0.8854 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
K/G | 0.7868 | likely_pathogenic | 0.7105 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/H | 0.4032 | ambiguous | 0.3607 | ambiguous | -0.958 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/I | 0.7723 | likely_pathogenic | 0.6602 | pathogenic | 0.448 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
K/L | 0.7471 | likely_pathogenic | 0.6632 | pathogenic | 0.448 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/M | 0.568 | likely_pathogenic | 0.4523 | ambiguous | 0.062 | Stabilizing | 1.0 | D | 0.777 | deleterious | N | 0.510478181 | None | None | N |
K/N | 0.7575 | likely_pathogenic | 0.6733 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.746 | deleterious | N | 0.481136709 | None | None | N |
K/P | 0.9819 | likely_pathogenic | 0.9773 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/Q | 0.2482 | likely_benign | 0.2075 | benign | -0.459 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.477133612 | None | None | N |
K/R | 0.0842 | likely_benign | 0.0815 | benign | -0.459 | Destabilizing | 0.999 | D | 0.562 | neutral | N | 0.469399563 | None | None | N |
K/S | 0.7109 | likely_pathogenic | 0.6255 | pathogenic | -1.025 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
K/T | 0.4322 | ambiguous | 0.3236 | benign | -0.711 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.447442636 | None | None | N |
K/V | 0.6682 | likely_pathogenic | 0.5445 | ambiguous | 0.18 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
K/W | 0.903 | likely_pathogenic | 0.8618 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/Y | 0.8347 | likely_pathogenic | 0.7708 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.