Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19051 | 57376;57377;57378 | chr2:178598019;178598018;178598017 | chr2:179462746;179462745;179462744 |
N2AB | 17410 | 52453;52454;52455 | chr2:178598019;178598018;178598017 | chr2:179462746;179462745;179462744 |
N2A | 16483 | 49672;49673;49674 | chr2:178598019;178598018;178598017 | chr2:179462746;179462745;179462744 |
N2B | 9986 | 30181;30182;30183 | chr2:178598019;178598018;178598017 | chr2:179462746;179462745;179462744 |
Novex-1 | 10111 | 30556;30557;30558 | chr2:178598019;178598018;178598017 | chr2:179462746;179462745;179462744 |
Novex-2 | 10178 | 30757;30758;30759 | chr2:178598019;178598018;178598017 | chr2:179462746;179462745;179462744 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.001 | N | 0.207 | 0.233 | 0.148003135375 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0713 | likely_benign | 0.0695 | benign | -0.472 | Destabilizing | None | N | 0.123 | neutral | N | 0.487006675 | None | None | N |
T/C | 0.297 | likely_benign | 0.2882 | benign | -0.32 | Destabilizing | 0.944 | D | 0.52 | neutral | None | None | None | None | N |
T/D | 0.3186 | likely_benign | 0.309 | benign | 0.525 | Stabilizing | 0.388 | N | 0.511 | neutral | None | None | None | None | N |
T/E | 0.2357 | likely_benign | 0.2334 | benign | 0.457 | Stabilizing | 0.388 | N | 0.453 | neutral | None | None | None | None | N |
T/F | 0.2616 | likely_benign | 0.2455 | benign | -0.997 | Destabilizing | 0.818 | D | 0.597 | neutral | None | None | None | None | N |
T/G | 0.1493 | likely_benign | 0.1527 | benign | -0.593 | Destabilizing | 0.116 | N | 0.461 | neutral | None | None | None | None | N |
T/H | 0.2026 | likely_benign | 0.1959 | benign | -0.866 | Destabilizing | 0.981 | D | 0.574 | neutral | None | None | None | None | N |
T/I | 0.1636 | likely_benign | 0.1557 | benign | -0.273 | Destabilizing | 0.627 | D | 0.545 | neutral | N | 0.512654481 | None | None | N |
T/K | 0.1614 | likely_benign | 0.1629 | benign | -0.227 | Destabilizing | 0.324 | N | 0.476 | neutral | N | 0.447717569 | None | None | N |
T/L | 0.0912 | likely_benign | 0.0906 | benign | -0.273 | Destabilizing | 0.241 | N | 0.441 | neutral | None | None | None | None | N |
T/M | 0.0987 | likely_benign | 0.0927 | benign | -0.117 | Destabilizing | 0.932 | D | 0.529 | neutral | None | None | None | None | N |
T/N | 0.1047 | likely_benign | 0.1008 | benign | -0.052 | Destabilizing | 0.818 | D | 0.445 | neutral | None | None | None | None | N |
T/P | 0.0612 | likely_benign | 0.0609 | benign | -0.311 | Destabilizing | 0.001 | N | 0.207 | neutral | N | 0.464841892 | None | None | N |
T/Q | 0.1664 | likely_benign | 0.1691 | benign | -0.242 | Destabilizing | 0.818 | D | 0.551 | neutral | None | None | None | None | N |
T/R | 0.1686 | likely_benign | 0.1662 | benign | -0.026 | Destabilizing | 0.773 | D | 0.553 | neutral | N | 0.47984863 | None | None | N |
T/S | 0.0902 | likely_benign | 0.0859 | benign | -0.332 | Destabilizing | 0.09 | N | 0.373 | neutral | N | 0.445234624 | None | None | N |
T/V | 0.1262 | likely_benign | 0.1229 | benign | -0.311 | Destabilizing | 0.116 | N | 0.333 | neutral | None | None | None | None | N |
T/W | 0.5611 | ambiguous | 0.5345 | ambiguous | -0.977 | Destabilizing | 0.981 | D | 0.62 | neutral | None | None | None | None | N |
T/Y | 0.2774 | likely_benign | 0.2519 | benign | -0.686 | Destabilizing | 0.932 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.