Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19068 | 57427;57428;57429 | chr2:178597968;178597967;178597966 | chr2:179462695;179462694;179462693 |
N2AB | 17427 | 52504;52505;52506 | chr2:178597968;178597967;178597966 | chr2:179462695;179462694;179462693 |
N2A | 16500 | 49723;49724;49725 | chr2:178597968;178597967;178597966 | chr2:179462695;179462694;179462693 |
N2B | 10003 | 30232;30233;30234 | chr2:178597968;178597967;178597966 | chr2:179462695;179462694;179462693 |
Novex-1 | 10128 | 30607;30608;30609 | chr2:178597968;178597967;178597966 | chr2:179462695;179462694;179462693 |
Novex-2 | 10195 | 30808;30809;30810 | chr2:178597968;178597967;178597966 | chr2:179462695;179462694;179462693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.001 | N | 0.209 | 0.06 | 0.266843984389 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0896 | likely_benign | 0.0876 | benign | -0.298 | Destabilizing | None | N | 0.096 | neutral | None | None | None | None | I |
I/C | 0.4496 | ambiguous | 0.4609 | ambiguous | -0.637 | Destabilizing | 0.356 | N | 0.392 | neutral | None | None | None | None | I |
I/D | 0.4574 | ambiguous | 0.3511 | ambiguous | 0.085 | Stabilizing | 0.038 | N | 0.478 | neutral | None | None | None | None | I |
I/E | 0.3329 | likely_benign | 0.2513 | benign | -0.019 | Destabilizing | 0.016 | N | 0.442 | neutral | None | None | None | None | I |
I/F | 0.1488 | likely_benign | 0.153 | benign | -0.532 | Destabilizing | 0.055 | N | 0.313 | neutral | N | 0.48311671 | None | None | I |
I/G | 0.3192 | likely_benign | 0.3128 | benign | -0.393 | Destabilizing | 0.007 | N | 0.43 | neutral | None | None | None | None | I |
I/H | 0.3527 | ambiguous | 0.3341 | benign | 0.113 | Stabilizing | 0.356 | N | 0.456 | neutral | None | None | None | None | I |
I/K | 0.2325 | likely_benign | 0.1844 | benign | -0.017 | Destabilizing | 0.016 | N | 0.441 | neutral | None | None | None | None | I |
I/L | 0.0928 | likely_benign | 0.0948 | benign | -0.186 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.466012541 | None | None | I |
I/M | 0.0728 | likely_benign | 0.0732 | benign | -0.278 | Destabilizing | 0.001 | N | 0.209 | neutral | N | 0.462414875 | None | None | I |
I/N | 0.1762 | likely_benign | 0.1532 | benign | 0.095 | Stabilizing | None | N | 0.199 | neutral | N | 0.476381463 | None | None | I |
I/P | 0.4963 | ambiguous | 0.5263 | ambiguous | -0.193 | Destabilizing | 0.072 | N | 0.548 | neutral | None | None | None | None | I |
I/Q | 0.2518 | likely_benign | 0.2205 | benign | -0.109 | Destabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | I |
I/R | 0.2028 | likely_benign | 0.1758 | benign | 0.407 | Stabilizing | 0.072 | N | 0.552 | neutral | None | None | None | None | I |
I/S | 0.1262 | likely_benign | 0.1173 | benign | -0.315 | Destabilizing | None | N | 0.123 | neutral | N | 0.42799287 | None | None | I |
I/T | 0.0863 | likely_benign | 0.0837 | benign | -0.315 | Destabilizing | 0.012 | N | 0.343 | neutral | N | 0.471378288 | None | None | I |
I/V | 0.0593 | likely_benign | 0.0617 | benign | -0.193 | Destabilizing | None | N | 0.073 | neutral | N | 0.465145749 | None | None | I |
I/W | 0.6968 | likely_pathogenic | 0.7072 | pathogenic | -0.557 | Destabilizing | 0.864 | D | 0.437 | neutral | None | None | None | None | I |
I/Y | 0.4297 | ambiguous | 0.4266 | ambiguous | -0.269 | Destabilizing | 0.356 | N | 0.435 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.