Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1907 | 5944;5945;5946 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
N2AB | 1907 | 5944;5945;5946 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
N2A | 1907 | 5944;5945;5946 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
N2B | 1861 | 5806;5807;5808 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
Novex-1 | 1861 | 5806;5807;5808 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
Novex-2 | 1861 | 5806;5807;5808 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
Novex-3 | 1907 | 5944;5945;5946 | chr2:178776145;178776144;178776143 | chr2:179640872;179640871;179640870 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.984 | N | 0.623 | 0.425 | 0.463672176093 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1131 | likely_benign | 0.1037 | benign | -0.741 | Destabilizing | 0.64 | D | 0.439 | neutral | N | 0.374403615 | None | None | N |
T/C | 0.5805 | likely_pathogenic | 0.5428 | ambiguous | -0.401 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
T/D | 0.7663 | likely_pathogenic | 0.6969 | pathogenic | 0.25 | Stabilizing | 0.919 | D | 0.573 | neutral | None | None | None | None | N |
T/E | 0.5733 | likely_pathogenic | 0.5147 | ambiguous | 0.228 | Stabilizing | 0.919 | D | 0.575 | neutral | None | None | None | None | N |
T/F | 0.6094 | likely_pathogenic | 0.4876 | ambiguous | -0.924 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/G | 0.3226 | likely_benign | 0.3106 | benign | -0.964 | Destabilizing | 0.851 | D | 0.618 | neutral | None | None | None | None | N |
T/H | 0.5321 | ambiguous | 0.4832 | ambiguous | -1.24 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/I | 0.5084 | ambiguous | 0.3942 | ambiguous | -0.248 | Destabilizing | 0.984 | D | 0.623 | neutral | N | 0.506025056 | None | None | N |
T/K | 0.464 | ambiguous | 0.4091 | ambiguous | -0.501 | Destabilizing | 0.896 | D | 0.571 | neutral | N | 0.482123677 | None | None | N |
T/L | 0.2545 | likely_benign | 0.1923 | benign | -0.248 | Destabilizing | 0.919 | D | 0.558 | neutral | None | None | None | None | N |
T/M | 0.157 | likely_benign | 0.1285 | benign | 0.031 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
T/N | 0.2688 | likely_benign | 0.2213 | benign | -0.346 | Destabilizing | 0.919 | D | 0.481 | neutral | None | None | None | None | N |
T/P | 0.7626 | likely_pathogenic | 0.7921 | pathogenic | -0.381 | Destabilizing | 0.984 | D | 0.62 | neutral | N | 0.512068058 | None | None | N |
T/Q | 0.4178 | ambiguous | 0.3775 | ambiguous | -0.541 | Destabilizing | 0.988 | D | 0.666 | neutral | None | None | None | None | N |
T/R | 0.4035 | ambiguous | 0.3522 | ambiguous | -0.291 | Destabilizing | 0.968 | D | 0.657 | neutral | N | 0.481406714 | None | None | N |
T/S | 0.1289 | likely_benign | 0.1217 | benign | -0.694 | Destabilizing | 0.046 | N | 0.183 | neutral | N | 0.389203819 | None | None | N |
T/V | 0.3295 | likely_benign | 0.2639 | benign | -0.381 | Destabilizing | 0.919 | D | 0.461 | neutral | None | None | None | None | N |
T/W | 0.9005 | likely_pathogenic | 0.8589 | pathogenic | -0.828 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
T/Y | 0.6653 | likely_pathogenic | 0.5683 | pathogenic | -0.592 | Destabilizing | 0.996 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.