Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19103 | 57532;57533;57534 | chr2:178597775;178597774;178597773 | chr2:179462502;179462501;179462500 |
N2AB | 17462 | 52609;52610;52611 | chr2:178597775;178597774;178597773 | chr2:179462502;179462501;179462500 |
N2A | 16535 | 49828;49829;49830 | chr2:178597775;178597774;178597773 | chr2:179462502;179462501;179462500 |
N2B | 10038 | 30337;30338;30339 | chr2:178597775;178597774;178597773 | chr2:179462502;179462501;179462500 |
Novex-1 | 10163 | 30712;30713;30714 | chr2:178597775;178597774;178597773 | chr2:179462502;179462501;179462500 |
Novex-2 | 10230 | 30913;30914;30915 | chr2:178597775;178597774;178597773 | chr2:179462502;179462501;179462500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.998 | N | 0.496 | 0.402 | 0.722099309044 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
V/I | None | None | 0.767 | D | 0.307 | 0.262 | 0.547212138244 | gnomAD-4.0.0 | 4.10669E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.3978E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3232 | likely_benign | 0.3695 | ambiguous | -1.199 | Destabilizing | 0.998 | D | 0.496 | neutral | N | 0.493467917 | None | None | I |
V/C | 0.8525 | likely_pathogenic | 0.8445 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
V/D | 0.7983 | likely_pathogenic | 0.837 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.504205566 | None | None | I |
V/E | 0.6204 | likely_pathogenic | 0.6728 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
V/F | 0.3864 | ambiguous | 0.4374 | ambiguous | -0.903 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.51657583 | None | None | I |
V/G | 0.568 | likely_pathogenic | 0.6454 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.52758974 | None | None | I |
V/H | 0.7931 | likely_pathogenic | 0.824 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/I | 0.0848 | likely_benign | 0.0836 | benign | -0.525 | Destabilizing | 0.767 | D | 0.307 | neutral | D | 0.526653647 | None | None | I |
V/K | 0.6364 | likely_pathogenic | 0.6936 | pathogenic | -1.107 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/L | 0.3281 | likely_benign | 0.3685 | ambiguous | -0.525 | Destabilizing | 0.981 | D | 0.473 | neutral | N | 0.489317315 | None | None | I |
V/M | 0.2251 | likely_benign | 0.2483 | benign | -0.435 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
V/N | 0.5483 | ambiguous | 0.5885 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/P | 0.901 | likely_pathogenic | 0.9179 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
V/Q | 0.5427 | ambiguous | 0.574 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
V/R | 0.5732 | likely_pathogenic | 0.6386 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/S | 0.4008 | ambiguous | 0.4357 | ambiguous | -1.332 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/T | 0.1839 | likely_benign | 0.1832 | benign | -1.238 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | I |
V/W | 0.9407 | likely_pathogenic | 0.9527 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
V/Y | 0.8167 | likely_pathogenic | 0.8349 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.