Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1911 | 5956;5957;5958 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
N2AB | 1911 | 5956;5957;5958 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
N2A | 1911 | 5956;5957;5958 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
N2B | 1865 | 5818;5819;5820 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
Novex-1 | 1865 | 5818;5819;5820 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
Novex-2 | 1865 | 5818;5819;5820 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
Novex-3 | 1911 | 5956;5957;5958 | chr2:178776133;178776132;178776131 | chr2:179640860;179640859;179640858 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1473622038 | None | 0.722 | N | 0.493 | 0.145 | 0.148003135375 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs1473622038 | None | 0.722 | N | 0.493 | 0.145 | 0.148003135375 | gnomAD-4.0.0 | 6.56978E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6186 | likely_pathogenic | 0.7821 | pathogenic | -1.28 | Destabilizing | 0.775 | D | 0.501 | neutral | None | None | None | None | N |
K/C | 0.7405 | likely_pathogenic | 0.8009 | pathogenic | -1.509 | Destabilizing | 0.996 | D | 0.747 | deleterious | None | None | None | None | N |
K/D | 0.9669 | likely_pathogenic | 0.9843 | pathogenic | -1.533 | Destabilizing | 0.923 | D | 0.54 | neutral | None | None | None | None | N |
K/E | 0.5849 | likely_pathogenic | 0.7705 | pathogenic | -1.299 | Destabilizing | 0.722 | D | 0.509 | neutral | N | 0.421454695 | None | None | N |
K/F | 0.908 | likely_pathogenic | 0.9504 | pathogenic | -0.589 | Destabilizing | 0.987 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/G | 0.8622 | likely_pathogenic | 0.9266 | pathogenic | -1.713 | Destabilizing | 0.775 | D | 0.555 | neutral | None | None | None | None | N |
K/H | 0.4936 | ambiguous | 0.5775 | pathogenic | -1.916 | Destabilizing | 0.961 | D | 0.62 | neutral | None | None | None | None | N |
K/I | 0.4667 | ambiguous | 0.6186 | pathogenic | -0.082 | Destabilizing | 0.961 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/L | 0.5162 | ambiguous | 0.6516 | pathogenic | -0.082 | Destabilizing | 0.775 | D | 0.555 | neutral | None | None | None | None | N |
K/M | 0.2874 | likely_benign | 0.4478 | ambiguous | -0.47 | Destabilizing | 0.995 | D | 0.615 | neutral | N | 0.419960877 | None | None | N |
K/N | 0.8315 | likely_pathogenic | 0.9121 | pathogenic | -1.605 | Destabilizing | 0.722 | D | 0.444 | neutral | N | 0.468600584 | None | None | N |
K/P | 0.997 | likely_pathogenic | 0.9984 | pathogenic | -0.458 | Destabilizing | 0.987 | D | 0.593 | neutral | None | None | None | None | N |
K/Q | 0.2357 | likely_benign | 0.3483 | ambiguous | -1.397 | Destabilizing | 0.722 | D | 0.474 | neutral | N | 0.419957366 | None | None | N |
K/R | 0.1045 | likely_benign | 0.1109 | benign | -1.233 | Destabilizing | 0.003 | N | 0.233 | neutral | N | 0.394262974 | None | None | N |
K/S | 0.7193 | likely_pathogenic | 0.8511 | pathogenic | -2.132 | Highly Destabilizing | 0.775 | D | 0.421 | neutral | None | None | None | None | N |
K/T | 0.2562 | likely_benign | 0.4257 | ambiguous | -1.67 | Destabilizing | 0.722 | D | 0.493 | neutral | N | 0.390947342 | None | None | N |
K/V | 0.4117 | ambiguous | 0.5329 | ambiguous | -0.458 | Destabilizing | 0.961 | D | 0.59 | neutral | None | None | None | None | N |
K/W | 0.8948 | likely_pathogenic | 0.935 | pathogenic | -0.629 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/Y | 0.8355 | likely_pathogenic | 0.9014 | pathogenic | -0.278 | Destabilizing | 0.987 | D | 0.693 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.