Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19114 | 57565;57566;57567 | chr2:178597742;178597741;178597740 | chr2:179462469;179462468;179462467 |
N2AB | 17473 | 52642;52643;52644 | chr2:178597742;178597741;178597740 | chr2:179462469;179462468;179462467 |
N2A | 16546 | 49861;49862;49863 | chr2:178597742;178597741;178597740 | chr2:179462469;179462468;179462467 |
N2B | 10049 | 30370;30371;30372 | chr2:178597742;178597741;178597740 | chr2:179462469;179462468;179462467 |
Novex-1 | 10174 | 30745;30746;30747 | chr2:178597742;178597741;178597740 | chr2:179462469;179462468;179462467 |
Novex-2 | 10241 | 30946;30947;30948 | chr2:178597742;178597741;178597740 | chr2:179462469;179462468;179462467 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs2052103828 | None | 1.0 | N | 0.847 | 0.429 | 0.385417323374 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6773 | likely_pathogenic | 0.725 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/D | 0.9962 | likely_pathogenic | 0.9977 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.881 | deleterious | N | 0.486268765 | None | None | N |
A/E | 0.9954 | likely_pathogenic | 0.9971 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
A/F | 0.9363 | likely_pathogenic | 0.9613 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
A/G | 0.2774 | likely_benign | 0.3291 | benign | -0.812 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.46791102 | None | None | N |
A/H | 0.9941 | likely_pathogenic | 0.9964 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
A/I | 0.7742 | likely_pathogenic | 0.8493 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/K | 0.9981 | likely_pathogenic | 0.9989 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
A/L | 0.7218 | likely_pathogenic | 0.7799 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/M | 0.8392 | likely_pathogenic | 0.8879 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/N | 0.9815 | likely_pathogenic | 0.9889 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
A/P | 0.9882 | likely_pathogenic | 0.9942 | pathogenic | 0.152 | Stabilizing | 1.0 | D | 0.865 | deleterious | N | 0.486268765 | None | None | N |
A/Q | 0.9868 | likely_pathogenic | 0.9905 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/R | 0.9932 | likely_pathogenic | 0.9955 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
A/S | 0.2933 | likely_benign | 0.3469 | ambiguous | -0.838 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.462884591 | None | None | N |
A/T | 0.3799 | ambiguous | 0.4878 | ambiguous | -0.618 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.474151991 | None | None | N |
A/V | 0.4514 | ambiguous | 0.5594 | ambiguous | 0.152 | Stabilizing | 1.0 | D | 0.762 | deleterious | N | 0.457803197 | None | None | N |
A/W | 0.9966 | likely_pathogenic | 0.9982 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
A/Y | 0.9801 | likely_pathogenic | 0.9879 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.