Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19194 | 57805;57806;57807 | chr2:178595774;178595773;178595772 | chr2:179460501;179460500;179460499 |
N2AB | 17553 | 52882;52883;52884 | chr2:178595774;178595773;178595772 | chr2:179460501;179460500;179460499 |
N2A | 16626 | 50101;50102;50103 | chr2:178595774;178595773;178595772 | chr2:179460501;179460500;179460499 |
N2B | 10129 | 30610;30611;30612 | chr2:178595774;178595773;178595772 | chr2:179460501;179460500;179460499 |
Novex-1 | 10254 | 30985;30986;30987 | chr2:178595774;178595773;178595772 | chr2:179460501;179460500;179460499 |
Novex-2 | 10321 | 31186;31187;31188 | chr2:178595774;178595773;178595772 | chr2:179460501;179460500;179460499 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.024 | N | 0.247 | 0.115 | 0.185906805712 | gnomAD-4.0.0 | 6.86908E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01502E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1219 | likely_benign | 0.1182 | benign | -0.019 | Destabilizing | 0.014 | N | 0.217 | neutral | None | None | None | None | N |
H/C | 0.1509 | likely_benign | 0.1609 | benign | 0.791 | Stabilizing | 0.864 | D | 0.264 | neutral | None | None | None | None | N |
H/D | 0.0621 | likely_benign | 0.0669 | benign | -0.059 | Destabilizing | None | N | 0.125 | neutral | N | 0.400499625 | None | None | N |
H/E | 0.0949 | likely_benign | 0.0995 | benign | 0.001 | Stabilizing | None | N | 0.082 | neutral | None | None | None | None | N |
H/F | 0.2415 | likely_benign | 0.2287 | benign | 0.893 | Stabilizing | 0.628 | D | 0.381 | neutral | None | None | None | None | N |
H/G | 0.1449 | likely_benign | 0.1551 | benign | -0.358 | Destabilizing | 0.031 | N | 0.243 | neutral | None | None | None | None | N |
H/I | 0.1903 | likely_benign | 0.184 | benign | 0.881 | Stabilizing | 0.136 | N | 0.397 | neutral | None | None | None | None | N |
H/K | 0.141 | likely_benign | 0.1487 | benign | 0.111 | Stabilizing | 0.016 | N | 0.251 | neutral | None | None | None | None | N |
H/L | 0.1022 | likely_benign | 0.1002 | benign | 0.881 | Stabilizing | 0.055 | N | 0.364 | neutral | N | 0.388378476 | None | None | N |
H/M | 0.2949 | likely_benign | 0.2732 | benign | 0.725 | Stabilizing | 0.628 | D | 0.279 | neutral | None | None | None | None | N |
H/N | 0.0502 | likely_benign | 0.0494 | benign | 0.153 | Stabilizing | 0.012 | N | 0.238 | neutral | N | 0.421221614 | None | None | N |
H/P | 0.2819 | likely_benign | 0.3839 | ambiguous | 0.606 | Stabilizing | 0.106 | N | 0.369 | neutral | N | 0.43547899 | None | None | N |
H/Q | 0.0888 | likely_benign | 0.087 | benign | 0.323 | Stabilizing | 0.012 | N | 0.233 | neutral | N | 0.403713288 | None | None | N |
H/R | 0.098 | likely_benign | 0.1002 | benign | -0.553 | Destabilizing | 0.024 | N | 0.247 | neutral | N | 0.452851243 | None | None | N |
H/S | 0.0878 | likely_benign | 0.0823 | benign | 0.234 | Stabilizing | 0.016 | N | 0.227 | neutral | None | None | None | None | N |
H/T | 0.1065 | likely_benign | 0.1017 | benign | 0.395 | Stabilizing | 0.031 | N | 0.271 | neutral | None | None | None | None | N |
H/V | 0.1297 | likely_benign | 0.128 | benign | 0.606 | Stabilizing | 0.136 | N | 0.363 | neutral | None | None | None | None | N |
H/W | 0.3881 | ambiguous | 0.3984 | ambiguous | 0.996 | Stabilizing | 0.864 | D | 0.279 | neutral | None | None | None | None | N |
H/Y | 0.0914 | likely_benign | 0.0896 | benign | 1.211 | Stabilizing | 0.266 | N | 0.321 | neutral | N | 0.454064751 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.