Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19217 | 57874;57875;57876 | chr2:178595705;178595704;178595703 | chr2:179460432;179460431;179460430 |
N2AB | 17576 | 52951;52952;52953 | chr2:178595705;178595704;178595703 | chr2:179460432;179460431;179460430 |
N2A | 16649 | 50170;50171;50172 | chr2:178595705;178595704;178595703 | chr2:179460432;179460431;179460430 |
N2B | 10152 | 30679;30680;30681 | chr2:178595705;178595704;178595703 | chr2:179460432;179460431;179460430 |
Novex-1 | 10277 | 31054;31055;31056 | chr2:178595705;178595704;178595703 | chr2:179460432;179460431;179460430 |
Novex-2 | 10344 | 31255;31256;31257 | chr2:178595705;178595704;178595703 | chr2:179460432;179460431;179460430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.565 | 0.456 | 0.298403945805 | gnomAD-4.0.0 | 1.37294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.3546E-05 | 0 |
T/I | None | None | 1.0 | N | 0.86 | 0.41 | 0.485562757867 | gnomAD-4.0.0 | 1.60349E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1928 | likely_benign | 0.1983 | benign | -0.72 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.487172543 | None | None | I |
T/C | 0.5884 | likely_pathogenic | 0.5914 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
T/D | 0.8016 | likely_pathogenic | 0.8011 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
T/E | 0.667 | likely_pathogenic | 0.6819 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
T/F | 0.553 | ambiguous | 0.5737 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
T/G | 0.412 | ambiguous | 0.428 | ambiguous | -0.91 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
T/H | 0.467 | ambiguous | 0.4849 | ambiguous | -1.285 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
T/I | 0.4151 | ambiguous | 0.4078 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.86 | deleterious | N | 0.504053641 | None | None | I |
T/K | 0.4256 | ambiguous | 0.4794 | ambiguous | -0.714 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
T/L | 0.2041 | likely_benign | 0.1995 | benign | -0.32 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
T/M | 0.1656 | likely_benign | 0.1693 | benign | 0.127 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/N | 0.2816 | likely_benign | 0.2746 | benign | -0.591 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.482906582 | None | None | I |
T/P | 0.8225 | likely_pathogenic | 0.8169 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.50688664 | None | None | I |
T/Q | 0.3878 | ambiguous | 0.4069 | ambiguous | -0.888 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
T/R | 0.3756 | ambiguous | 0.4365 | ambiguous | -0.374 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
T/S | 0.1662 | likely_benign | 0.1759 | benign | -0.802 | Destabilizing | 0.999 | D | 0.578 | neutral | N | 0.470959788 | None | None | I |
T/V | 0.3088 | likely_benign | 0.299 | benign | -0.424 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | I |
T/W | 0.8422 | likely_pathogenic | 0.8558 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
T/Y | 0.6106 | likely_pathogenic | 0.6317 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.