Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19242 | 57949;57950;57951 | chr2:178595630;178595629;178595628 | chr2:179460357;179460356;179460355 |
N2AB | 17601 | 53026;53027;53028 | chr2:178595630;178595629;178595628 | chr2:179460357;179460356;179460355 |
N2A | 16674 | 50245;50246;50247 | chr2:178595630;178595629;178595628 | chr2:179460357;179460356;179460355 |
N2B | 10177 | 30754;30755;30756 | chr2:178595630;178595629;178595628 | chr2:179460357;179460356;179460355 |
Novex-1 | 10302 | 31129;31130;31131 | chr2:178595630;178595629;178595628 | chr2:179460357;179460356;179460355 |
Novex-2 | 10369 | 31330;31331;31332 | chr2:178595630;178595629;178595628 | chr2:179460357;179460356;179460355 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1201568754 | None | 0.201 | N | 0.459 | 0.124 | 0.110078149338 | gnomAD-4.0.0 | 6.88921E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0352E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3371 | likely_benign | 0.3413 | ambiguous | -0.98 | Destabilizing | 0.25 | N | 0.523 | neutral | None | None | None | None | N |
N/C | 0.3118 | likely_benign | 0.3514 | ambiguous | -0.056 | Destabilizing | 0.947 | D | 0.738 | prob.delet. | None | None | None | None | N |
N/D | 0.2758 | likely_benign | 0.2808 | benign | -0.841 | Destabilizing | 0.201 | N | 0.399 | neutral | N | 0.490140194 | None | None | N |
N/E | 0.5867 | likely_pathogenic | 0.578 | pathogenic | -0.688 | Destabilizing | 0.25 | N | 0.447 | neutral | None | None | None | None | N |
N/F | 0.5875 | likely_pathogenic | 0.5798 | pathogenic | -0.484 | Destabilizing | 0.826 | D | 0.761 | deleterious | None | None | None | None | N |
N/G | 0.448 | ambiguous | 0.4468 | ambiguous | -1.369 | Destabilizing | 0.25 | N | 0.441 | neutral | None | None | None | None | N |
N/H | 0.1578 | likely_benign | 0.154 | benign | -1.024 | Destabilizing | 0.781 | D | 0.571 | neutral | N | 0.477114969 | None | None | N |
N/I | 0.2948 | likely_benign | 0.32 | benign | 0.041 | Stabilizing | 0.638 | D | 0.752 | deleterious | N | 0.496778165 | None | None | N |
N/K | 0.6357 | likely_pathogenic | 0.6404 | pathogenic | -0.435 | Destabilizing | 0.201 | N | 0.459 | neutral | N | 0.453891392 | None | None | N |
N/L | 0.3576 | ambiguous | 0.3693 | ambiguous | 0.041 | Stabilizing | 0.7 | D | 0.681 | prob.neutral | None | None | None | None | N |
N/M | 0.3421 | ambiguous | 0.3511 | ambiguous | 0.379 | Stabilizing | 0.982 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/P | 0.9394 | likely_pathogenic | 0.9453 | pathogenic | -0.27 | Destabilizing | 0.7 | D | 0.674 | neutral | None | None | None | None | N |
N/Q | 0.5035 | ambiguous | 0.4825 | ambiguous | -0.851 | Destabilizing | 0.7 | D | 0.553 | neutral | None | None | None | None | N |
N/R | 0.6982 | likely_pathogenic | 0.6864 | pathogenic | -0.583 | Destabilizing | 0.7 | D | 0.529 | neutral | None | None | None | None | N |
N/S | 0.1149 | likely_benign | 0.1189 | benign | -1.093 | Destabilizing | 0.002 | N | 0.302 | neutral | N | 0.410116399 | None | None | N |
N/T | 0.1463 | likely_benign | 0.1549 | benign | -0.749 | Destabilizing | 0.201 | N | 0.399 | neutral | N | 0.437804432 | None | None | N |
N/V | 0.2883 | likely_benign | 0.3048 | benign | -0.27 | Destabilizing | 0.7 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/W | 0.83 | likely_pathogenic | 0.8138 | pathogenic | -0.291 | Destabilizing | 0.982 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/Y | 0.2118 | likely_benign | 0.2137 | benign | -0.07 | Destabilizing | 0.781 | D | 0.714 | prob.delet. | N | 0.509168672 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.