Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19259 | 58000;58001;58002 | chr2:178595579;178595578;178595577 | chr2:179460306;179460305;179460304 |
N2AB | 17618 | 53077;53078;53079 | chr2:178595579;178595578;178595577 | chr2:179460306;179460305;179460304 |
N2A | 16691 | 50296;50297;50298 | chr2:178595579;178595578;178595577 | chr2:179460306;179460305;179460304 |
N2B | 10194 | 30805;30806;30807 | chr2:178595579;178595578;178595577 | chr2:179460306;179460305;179460304 |
Novex-1 | 10319 | 31180;31181;31182 | chr2:178595579;178595578;178595577 | chr2:179460306;179460305;179460304 |
Novex-2 | 10386 | 31381;31382;31383 | chr2:178595579;178595578;178595577 | chr2:179460306;179460305;179460304 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs868535712 | -0.349 | 1.0 | N | 0.647 | 0.4 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.42E-05 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs868535712 | -0.349 | 1.0 | N | 0.647 | 0.4 | None | gnomAD-4.0.0 | 2.02777E-05 | None | None | None | None | N | None | 5.3904E-05 | 1.82535E-05 | None | 0 | 0 | None | 0 | 0 | 2.15432E-05 | 0 | 3.26691E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6486 | likely_pathogenic | 0.6665 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/D | 0.9948 | likely_pathogenic | 0.9956 | pathogenic | -2.726 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/E | 0.9839 | likely_pathogenic | 0.9859 | pathogenic | -2.453 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.491536955 | None | None | N |
A/F | 0.9613 | likely_pathogenic | 0.9624 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
A/G | 0.314 | likely_benign | 0.3173 | benign | -1.79 | Destabilizing | 1.0 | D | 0.606 | neutral | N | 0.470687676 | None | None | N |
A/H | 0.9756 | likely_pathogenic | 0.975 | pathogenic | -2.286 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
A/I | 0.9313 | likely_pathogenic | 0.9492 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/K | 0.9837 | likely_pathogenic | 0.9851 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/L | 0.839 | likely_pathogenic | 0.8514 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
A/M | 0.8292 | likely_pathogenic | 0.8609 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
A/N | 0.9752 | likely_pathogenic | 0.9758 | pathogenic | -1.823 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
A/P | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.49381836 | None | None | N |
A/Q | 0.9263 | likely_pathogenic | 0.9243 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/R | 0.9435 | likely_pathogenic | 0.9424 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/S | 0.2486 | likely_benign | 0.2522 | benign | -2.167 | Highly Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.440906239 | None | None | N |
A/T | 0.5661 | likely_pathogenic | 0.6059 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | N | 0.479904558 | None | None | N |
A/V | 0.7233 | likely_pathogenic | 0.7768 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.465705897 | None | None | N |
A/W | 0.995 | likely_pathogenic | 0.9946 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/Y | 0.9807 | likely_pathogenic | 0.9816 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.