Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19272 | 58039;58040;58041 | chr2:178595540;178595539;178595538 | chr2:179460267;179460266;179460265 |
N2AB | 17631 | 53116;53117;53118 | chr2:178595540;178595539;178595538 | chr2:179460267;179460266;179460265 |
N2A | 16704 | 50335;50336;50337 | chr2:178595540;178595539;178595538 | chr2:179460267;179460266;179460265 |
N2B | 10207 | 30844;30845;30846 | chr2:178595540;178595539;178595538 | chr2:179460267;179460266;179460265 |
Novex-1 | 10332 | 31219;31220;31221 | chr2:178595540;178595539;178595538 | chr2:179460267;179460266;179460265 |
Novex-2 | 10399 | 31420;31421;31422 | chr2:178595540;178595539;178595538 | chr2:179460267;179460266;179460265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.997 | N | 0.703 | 0.269 | 0.204665344411 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/I | rs1049715521 | None | 0.999 | N | 0.886 | 0.355 | 0.423119698836 | gnomAD-4.0.0 | 5.66484E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.45084E-06 | 1.24772E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2537 | likely_benign | 0.285 | benign | -0.806 | Destabilizing | 0.997 | D | 0.703 | prob.delet. | N | 0.495849871 | None | None | N |
T/C | 0.7104 | likely_pathogenic | 0.6941 | pathogenic | -0.239 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
T/D | 0.8071 | likely_pathogenic | 0.8581 | pathogenic | 0.299 | Stabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
T/E | 0.8173 | likely_pathogenic | 0.8693 | pathogenic | 0.433 | Stabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
T/F | 0.6862 | likely_pathogenic | 0.7098 | pathogenic | -0.69 | Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
T/G | 0.5394 | ambiguous | 0.5491 | ambiguous | -1.154 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
T/H | 0.7659 | likely_pathogenic | 0.8082 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
T/I | 0.4695 | ambiguous | 0.5092 | ambiguous | 0.076 | Stabilizing | 0.999 | D | 0.886 | deleterious | N | 0.513454197 | None | None | N |
T/K | 0.783 | likely_pathogenic | 0.8408 | pathogenic | 0.225 | Stabilizing | 0.999 | D | 0.881 | deleterious | N | 0.470351145 | None | None | N |
T/L | 0.2244 | likely_benign | 0.2165 | benign | 0.076 | Stabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
T/M | 0.1557 | likely_benign | 0.1593 | benign | -0.047 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
T/N | 0.3657 | ambiguous | 0.412 | ambiguous | -0.131 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
T/P | 0.6845 | likely_pathogenic | 0.7615 | pathogenic | -0.187 | Destabilizing | 0.999 | D | 0.85 | deleterious | N | 0.473549015 | None | None | N |
T/Q | 0.7216 | likely_pathogenic | 0.7734 | pathogenic | -0.024 | Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
T/R | 0.7716 | likely_pathogenic | 0.835 | pathogenic | 0.086 | Stabilizing | 0.999 | D | 0.849 | deleterious | N | 0.4780866 | None | None | N |
T/S | 0.2507 | likely_benign | 0.2629 | benign | -0.563 | Destabilizing | 0.997 | D | 0.694 | prob.delet. | N | 0.490001334 | None | None | N |
T/V | 0.3944 | ambiguous | 0.4224 | ambiguous | -0.187 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/W | 0.934 | likely_pathogenic | 0.9424 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
T/Y | 0.7794 | likely_pathogenic | 0.8187 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.