Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19294 | 58105;58106;58107 | chr2:178594614;178594613;178594612 | chr2:179459341;179459340;179459339 |
N2AB | 17653 | 53182;53183;53184 | chr2:178594614;178594613;178594612 | chr2:179459341;179459340;179459339 |
N2A | 16726 | 50401;50402;50403 | chr2:178594614;178594613;178594612 | chr2:179459341;179459340;179459339 |
N2B | 10229 | 30910;30911;30912 | chr2:178594614;178594613;178594612 | chr2:179459341;179459340;179459339 |
Novex-1 | 10354 | 31285;31286;31287 | chr2:178594614;178594613;178594612 | chr2:179459341;179459340;179459339 |
Novex-2 | 10421 | 31486;31487;31488 | chr2:178594614;178594613;178594612 | chr2:179459341;179459340;179459339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.007 | N | 0.123 | 0.037 | 0.0551355673512 | gnomAD-4.0.0 | 1.5964E-06 | None | None | None | None | N | None | 0 | 2.294E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2343 | likely_benign | 0.2617 | benign | -0.126 | Destabilizing | 0.373 | N | 0.327 | neutral | None | None | None | None | N |
K/C | 0.5958 | likely_pathogenic | 0.6294 | pathogenic | -0.244 | Destabilizing | 0.996 | D | 0.373 | neutral | None | None | None | None | N |
K/D | 0.499 | ambiguous | 0.5642 | pathogenic | 0.15 | Stabilizing | 0.59 | D | 0.389 | neutral | None | None | None | None | N |
K/E | 0.1298 | likely_benign | 0.1396 | benign | 0.198 | Stabilizing | 0.472 | N | 0.455 | neutral | N | 0.415103718 | None | None | N |
K/F | 0.7209 | likely_pathogenic | 0.737 | pathogenic | -0.043 | Destabilizing | 0.953 | D | 0.412 | neutral | None | None | None | None | N |
K/G | 0.3997 | ambiguous | 0.4492 | ambiguous | -0.408 | Destabilizing | 0.373 | N | 0.37 | neutral | None | None | None | None | N |
K/H | 0.2994 | likely_benign | 0.3262 | benign | -0.679 | Destabilizing | 0.953 | D | 0.398 | neutral | None | None | None | None | N |
K/I | 0.2369 | likely_benign | 0.2494 | benign | 0.561 | Stabilizing | 0.884 | D | 0.415 | neutral | N | 0.428995735 | None | None | N |
K/L | 0.2607 | likely_benign | 0.2889 | benign | 0.561 | Stabilizing | 0.59 | D | 0.399 | neutral | None | None | None | None | N |
K/M | 0.1655 | likely_benign | 0.1752 | benign | 0.322 | Stabilizing | 0.984 | D | 0.399 | neutral | None | None | None | None | N |
K/N | 0.3413 | ambiguous | 0.3993 | ambiguous | 0.077 | Stabilizing | 0.007 | N | 0.123 | neutral | N | 0.464167101 | None | None | N |
K/P | 0.8761 | likely_pathogenic | 0.8865 | pathogenic | 0.363 | Stabilizing | 0.854 | D | 0.442 | neutral | None | None | None | None | N |
K/Q | 0.1184 | likely_benign | 0.1195 | benign | -0.063 | Destabilizing | 0.684 | D | 0.475 | neutral | N | 0.454470183 | None | None | N |
K/R | 0.0963 | likely_benign | 0.0931 | benign | -0.213 | Destabilizing | 0.684 | D | 0.438 | neutral | N | 0.460241362 | None | None | N |
K/S | 0.2997 | likely_benign | 0.3378 | benign | -0.493 | Destabilizing | 0.101 | N | 0.099 | neutral | None | None | None | None | N |
K/T | 0.0858 | likely_benign | 0.0944 | benign | -0.271 | Destabilizing | 0.004 | N | 0.105 | neutral | N | 0.373851741 | None | None | N |
K/V | 0.1993 | likely_benign | 0.2176 | benign | 0.363 | Stabilizing | 0.59 | D | 0.405 | neutral | None | None | None | None | N |
K/W | 0.7672 | likely_pathogenic | 0.7724 | pathogenic | 0.018 | Stabilizing | 0.996 | D | 0.431 | neutral | None | None | None | None | N |
K/Y | 0.6327 | likely_pathogenic | 0.6508 | pathogenic | 0.325 | Stabilizing | 0.984 | D | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.