Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19309 | 58150;58151;58152 | chr2:178594569;178594568;178594567 | chr2:179459296;179459295;179459294 |
N2AB | 17668 | 53227;53228;53229 | chr2:178594569;178594568;178594567 | chr2:179459296;179459295;179459294 |
N2A | 16741 | 50446;50447;50448 | chr2:178594569;178594568;178594567 | chr2:179459296;179459295;179459294 |
N2B | 10244 | 30955;30956;30957 | chr2:178594569;178594568;178594567 | chr2:179459296;179459295;179459294 |
Novex-1 | 10369 | 31330;31331;31332 | chr2:178594569;178594568;178594567 | chr2:179459296;179459295;179459294 |
Novex-2 | 10436 | 31531;31532;31533 | chr2:178594569;178594568;178594567 | chr2:179459296;179459295;179459294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 0.997 | N | 0.651 | 0.418 | 0.39619538035 | gnomAD-4.0.0 | 6.8451E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99755E-07 | 0 | 0 |
K/R | None | None | 0.998 | N | 0.607 | 0.238 | 0.427829143865 | gnomAD-4.0.0 | 2.05353E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79951E-06 | 1.16093E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6451 | likely_pathogenic | 0.5783 | pathogenic | 0.039 | Stabilizing | 0.996 | D | 0.608 | neutral | None | None | None | None | I |
K/C | 0.8983 | likely_pathogenic | 0.8741 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/D | 0.8973 | likely_pathogenic | 0.8436 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
K/E | 0.56 | ambiguous | 0.4546 | ambiguous | -0.062 | Destabilizing | 0.998 | D | 0.631 | neutral | N | 0.467263335 | None | None | I |
K/F | 0.9559 | likely_pathogenic | 0.9283 | pathogenic | -0.015 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/G | 0.8286 | likely_pathogenic | 0.7732 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | I |
K/H | 0.638 | likely_pathogenic | 0.5868 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
K/I | 0.606 | likely_pathogenic | 0.5164 | ambiguous | 0.571 | Stabilizing | 0.995 | D | 0.649 | neutral | None | None | None | None | I |
K/L | 0.6224 | likely_pathogenic | 0.5628 | ambiguous | 0.571 | Stabilizing | 0.269 | N | 0.361 | neutral | None | None | None | None | I |
K/M | 0.5994 | likely_pathogenic | 0.5146 | ambiguous | 0.149 | Stabilizing | 0.997 | D | 0.651 | neutral | N | 0.519868455 | None | None | I |
K/N | 0.8209 | likely_pathogenic | 0.7371 | pathogenic | 0.058 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.494220649 | None | None | I |
K/P | 0.8685 | likely_pathogenic | 0.8413 | pathogenic | 0.422 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
K/Q | 0.341 | ambiguous | 0.2941 | benign | -0.062 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | N | 0.467876519 | None | None | I |
K/R | 0.1072 | likely_benign | 0.1061 | benign | -0.127 | Destabilizing | 0.998 | D | 0.607 | neutral | N | 0.49523937 | None | None | I |
K/S | 0.7988 | likely_pathogenic | 0.7173 | pathogenic | -0.371 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
K/T | 0.4968 | ambiguous | 0.4075 | ambiguous | -0.192 | Destabilizing | 0.998 | D | 0.56 | neutral | N | 0.489948193 | None | None | I |
K/V | 0.5375 | ambiguous | 0.477 | ambiguous | 0.422 | Stabilizing | 0.983 | D | 0.523 | neutral | None | None | None | None | I |
K/W | 0.9568 | likely_pathogenic | 0.9319 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
K/Y | 0.9079 | likely_pathogenic | 0.8694 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.