Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19321 | 58186;58187;58188 | chr2:178594533;178594532;178594531 | chr2:179459260;179459259;179459258 |
N2AB | 17680 | 53263;53264;53265 | chr2:178594533;178594532;178594531 | chr2:179459260;179459259;179459258 |
N2A | 16753 | 50482;50483;50484 | chr2:178594533;178594532;178594531 | chr2:179459260;179459259;179459258 |
N2B | 10256 | 30991;30992;30993 | chr2:178594533;178594532;178594531 | chr2:179459260;179459259;179459258 |
Novex-1 | 10381 | 31366;31367;31368 | chr2:178594533;178594532;178594531 | chr2:179459260;179459259;179459258 |
Novex-2 | 10448 | 31567;31568;31569 | chr2:178594533;178594532;178594531 | chr2:179459260;179459259;179459258 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1395371412 | None | 1.0 | N | 0.935 | 0.696 | 0.752906115721 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9233 | likely_pathogenic | 0.9022 | pathogenic | -3.057 | Highly Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
L/C | 0.917 | likely_pathogenic | 0.9135 | pathogenic | -2.293 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -3.761 | Highly Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
L/E | 0.9964 | likely_pathogenic | 0.9949 | pathogenic | -3.42 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/F | 0.8667 | likely_pathogenic | 0.7692 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/G | 0.9942 | likely_pathogenic | 0.992 | pathogenic | -3.685 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/H | 0.9958 | likely_pathogenic | 0.9922 | pathogenic | -3.334 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/I | 0.0953 | likely_benign | 0.0848 | benign | -1.152 | Destabilizing | 0.999 | D | 0.528 | neutral | N | 0.412289912 | None | None | N |
L/K | 0.9949 | likely_pathogenic | 0.9923 | pathogenic | -2.577 | Highly Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
L/M | 0.3918 | ambiguous | 0.3194 | benign | -1.288 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/N | 0.9972 | likely_pathogenic | 0.9963 | pathogenic | -3.368 | Highly Destabilizing | 1.0 | D | 0.938 | deleterious | None | None | None | None | N |
L/P | 0.9922 | likely_pathogenic | 0.9879 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.935 | deleterious | N | 0.509888835 | None | None | N |
L/Q | 0.9913 | likely_pathogenic | 0.9853 | pathogenic | -2.97 | Highly Destabilizing | 1.0 | D | 0.942 | deleterious | N | 0.52124514 | None | None | N |
L/R | 0.9911 | likely_pathogenic | 0.9865 | pathogenic | -2.63 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | N | 0.52124514 | None | None | N |
L/S | 0.9946 | likely_pathogenic | 0.9914 | pathogenic | -3.919 | Highly Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
L/T | 0.9356 | likely_pathogenic | 0.9127 | pathogenic | -3.402 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/V | 0.1031 | likely_benign | 0.0931 | benign | -1.781 | Destabilizing | 0.999 | D | 0.544 | neutral | N | 0.41407385 | None | None | N |
L/W | 0.9905 | likely_pathogenic | 0.9785 | pathogenic | -2.246 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/Y | 0.9929 | likely_pathogenic | 0.9855 | pathogenic | -2.096 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.