Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19345 | 58258;58259;58260 | chr2:178594461;178594460;178594459 | chr2:179459188;179459187;179459186 |
N2AB | 17704 | 53335;53336;53337 | chr2:178594461;178594460;178594459 | chr2:179459188;179459187;179459186 |
N2A | 16777 | 50554;50555;50556 | chr2:178594461;178594460;178594459 | chr2:179459188;179459187;179459186 |
N2B | 10280 | 31063;31064;31065 | chr2:178594461;178594460;178594459 | chr2:179459188;179459187;179459186 |
Novex-1 | 10405 | 31438;31439;31440 | chr2:178594461;178594460;178594459 | chr2:179459188;179459187;179459186 |
Novex-2 | 10472 | 31639;31640;31641 | chr2:178594461;178594460;178594459 | chr2:179459188;179459187;179459186 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs567680958 | -0.875 | 0.726 | N | 0.52 | 0.406 | 0.266843984389 | gnomAD-2.1.1 | 3.62E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.9431E-04 | None | 0 | 0 | 0 |
T/A | rs567680958 | -0.875 | 0.726 | N | 0.52 | 0.406 | 0.266843984389 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
T/A | rs567680958 | -0.875 | 0.726 | N | 0.52 | 0.406 | 0.266843984389 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
T/A | rs567680958 | -0.875 | 0.726 | N | 0.52 | 0.406 | 0.266843984389 | gnomAD-4.0.0 | 1.17765E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.08672E-04 | 0 |
T/I | rs551040385 | 0.3 | 0.989 | N | 0.719 | 0.489 | 0.533276065955 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs551040385 | 0.3 | 0.989 | N | 0.719 | 0.489 | 0.533276065955 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs551040385 | 0.3 | 0.989 | N | 0.719 | 0.489 | 0.533276065955 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
T/I | rs551040385 | 0.3 | 0.989 | N | 0.719 | 0.489 | 0.533276065955 | gnomAD-4.0.0 | 6.57212E-06 | None | None | None | None | N | None | 2.40732E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs551040385 | None | 0.957 | N | 0.596 | 0.453 | 0.448300063881 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1219 | likely_benign | 0.1131 | benign | -0.805 | Destabilizing | 0.726 | D | 0.52 | neutral | N | 0.487758882 | None | None | N |
T/C | 0.4487 | ambiguous | 0.4323 | ambiguous | -0.516 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/D | 0.4989 | ambiguous | 0.4625 | ambiguous | -0.084 | Destabilizing | 0.983 | D | 0.653 | neutral | None | None | None | None | N |
T/E | 0.3139 | likely_benign | 0.2879 | benign | -0.05 | Destabilizing | 0.983 | D | 0.641 | neutral | None | None | None | None | N |
T/F | 0.4493 | ambiguous | 0.4111 | ambiguous | -0.795 | Destabilizing | 0.992 | D | 0.8 | deleterious | None | None | None | None | N |
T/G | 0.4675 | ambiguous | 0.4463 | ambiguous | -1.094 | Destabilizing | 0.895 | D | 0.631 | neutral | None | None | None | None | N |
T/H | 0.3746 | ambiguous | 0.3369 | benign | -1.322 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
T/I | 0.165 | likely_benign | 0.154 | benign | -0.119 | Destabilizing | 0.989 | D | 0.719 | prob.delet. | N | 0.497126951 | None | None | N |
T/K | 0.3193 | likely_benign | 0.2723 | benign | -0.673 | Destabilizing | 0.968 | D | 0.65 | neutral | None | None | None | None | N |
T/L | 0.1751 | likely_benign | 0.16 | benign | -0.119 | Destabilizing | 0.944 | D | 0.583 | neutral | None | None | None | None | N |
T/M | 0.1218 | likely_benign | 0.1107 | benign | 0.02 | Stabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
T/N | 0.2157 | likely_benign | 0.2018 | benign | -0.712 | Destabilizing | 0.957 | D | 0.596 | neutral | N | 0.487251903 | None | None | N |
T/P | 0.3653 | ambiguous | 0.3201 | benign | -0.314 | Destabilizing | 0.989 | D | 0.722 | prob.delet. | N | 0.479556128 | None | None | N |
T/Q | 0.2784 | likely_benign | 0.257 | benign | -0.768 | Destabilizing | 0.983 | D | 0.736 | prob.delet. | None | None | None | None | N |
T/R | 0.3063 | likely_benign | 0.2474 | benign | -0.535 | Destabilizing | 0.983 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/S | 0.1558 | likely_benign | 0.1496 | benign | -1.008 | Destabilizing | 0.146 | N | 0.391 | neutral | N | 0.487251903 | None | None | N |
T/V | 0.1199 | likely_benign | 0.1166 | benign | -0.314 | Destabilizing | 0.944 | D | 0.507 | neutral | None | None | None | None | N |
T/W | 0.8076 | likely_pathogenic | 0.775 | pathogenic | -0.765 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
T/Y | 0.5078 | ambiguous | 0.4612 | ambiguous | -0.513 | Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.