Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19354 | 58285;58286;58287 | chr2:178594434;178594433;178594432 | chr2:179459161;179459160;179459159 |
N2AB | 17713 | 53362;53363;53364 | chr2:178594434;178594433;178594432 | chr2:179459161;179459160;179459159 |
N2A | 16786 | 50581;50582;50583 | chr2:178594434;178594433;178594432 | chr2:179459161;179459160;179459159 |
N2B | 10289 | 31090;31091;31092 | chr2:178594434;178594433;178594432 | chr2:179459161;179459160;179459159 |
Novex-1 | 10414 | 31465;31466;31467 | chr2:178594434;178594433;178594432 | chr2:179459161;179459160;179459159 |
Novex-2 | 10481 | 31666;31667;31668 | chr2:178594434;178594433;178594432 | chr2:179459161;179459160;179459159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.961 | N | 0.442 | 0.259 | 0.328486982098 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1411 | likely_benign | 0.1379 | benign | -0.994 | Destabilizing | 0.835 | D | 0.308 | neutral | N | 0.501722625 | None | None | N |
T/C | 0.5128 | ambiguous | 0.5353 | ambiguous | -0.57 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
T/D | 0.7577 | likely_pathogenic | 0.7188 | pathogenic | -0.735 | Destabilizing | 0.97 | D | 0.563 | neutral | None | None | None | None | N |
T/E | 0.6283 | likely_pathogenic | 0.5731 | pathogenic | -0.611 | Destabilizing | 0.97 | D | 0.556 | neutral | None | None | None | None | N |
T/F | 0.5705 | likely_pathogenic | 0.536 | ambiguous | -0.736 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
T/G | 0.5107 | ambiguous | 0.4885 | ambiguous | -1.367 | Destabilizing | 0.97 | D | 0.581 | neutral | None | None | None | None | N |
T/H | 0.5191 | ambiguous | 0.4944 | ambiguous | -1.561 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/I | 0.2683 | likely_benign | 0.2503 | benign | -0.049 | Destabilizing | 0.994 | D | 0.641 | neutral | N | 0.515788 | None | None | N |
T/K | 0.5057 | ambiguous | 0.4311 | ambiguous | -0.597 | Destabilizing | 0.97 | D | 0.555 | neutral | None | None | None | None | N |
T/L | 0.2468 | likely_benign | 0.2253 | benign | -0.049 | Destabilizing | 0.985 | D | 0.515 | neutral | None | None | None | None | N |
T/M | 0.154 | likely_benign | 0.1503 | benign | 0.042 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
T/N | 0.2447 | likely_benign | 0.237 | benign | -0.947 | Destabilizing | 0.961 | D | 0.442 | neutral | N | 0.476978896 | None | None | N |
T/P | 0.5843 | likely_pathogenic | 0.5189 | ambiguous | -0.331 | Destabilizing | 0.994 | D | 0.645 | neutral | N | 0.466026413 | None | None | N |
T/Q | 0.4164 | ambiguous | 0.3835 | ambiguous | -0.862 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/R | 0.4546 | ambiguous | 0.3843 | ambiguous | -0.653 | Destabilizing | 0.996 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/S | 0.1634 | likely_benign | 0.1675 | benign | -1.217 | Destabilizing | 0.287 | N | 0.213 | neutral | N | 0.42110697 | None | None | N |
T/V | 0.2048 | likely_benign | 0.1948 | benign | -0.331 | Destabilizing | 0.985 | D | 0.399 | neutral | None | None | None | None | N |
T/W | 0.8621 | likely_pathogenic | 0.8431 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/Y | 0.5345 | ambiguous | 0.5126 | ambiguous | -0.48 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.