Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19356 | 58291;58292;58293 | chr2:178594428;178594427;178594426 | chr2:179459155;179459154;179459153 |
N2AB | 17715 | 53368;53369;53370 | chr2:178594428;178594427;178594426 | chr2:179459155;179459154;179459153 |
N2A | 16788 | 50587;50588;50589 | chr2:178594428;178594427;178594426 | chr2:179459155;179459154;179459153 |
N2B | 10291 | 31096;31097;31098 | chr2:178594428;178594427;178594426 | chr2:179459155;179459154;179459153 |
Novex-1 | 10416 | 31471;31472;31473 | chr2:178594428;178594427;178594426 | chr2:179459155;179459154;179459153 |
Novex-2 | 10483 | 31672;31673;31674 | chr2:178594428;178594427;178594426 | chr2:179459155;179459154;179459153 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.602 | 0.309 | 0.368369118721 | gnomAD-4.0.0 | 8.40229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18756E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8863 | likely_pathogenic | 0.8696 | pathogenic | -1.392 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.482297471 | None | None | N |
E/C | 0.9811 | likely_pathogenic | 0.9817 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/D | 0.9357 | likely_pathogenic | 0.9205 | pathogenic | -1.567 | Destabilizing | 0.999 | D | 0.602 | neutral | N | 0.4886538 | None | None | N |
E/F | 0.9898 | likely_pathogenic | 0.9861 | pathogenic | -0.97 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
E/G | 0.9471 | likely_pathogenic | 0.9354 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.50404903 | None | None | N |
E/H | 0.9856 | likely_pathogenic | 0.9835 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/I | 0.934 | likely_pathogenic | 0.9311 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/K | 0.9719 | likely_pathogenic | 0.9689 | pathogenic | -1.129 | Destabilizing | 0.999 | D | 0.629 | neutral | D | 0.524138125 | None | None | N |
E/L | 0.9673 | likely_pathogenic | 0.9629 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/M | 0.9538 | likely_pathogenic | 0.949 | pathogenic | 0.573 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/N | 0.9791 | likely_pathogenic | 0.9734 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/Q | 0.7433 | likely_pathogenic | 0.7336 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.501146622 | None | None | N |
E/R | 0.9688 | likely_pathogenic | 0.9654 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/S | 0.9129 | likely_pathogenic | 0.9003 | pathogenic | -2.127 | Highly Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
E/T | 0.9435 | likely_pathogenic | 0.9369 | pathogenic | -1.714 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/V | 0.894 | likely_pathogenic | 0.8843 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | D | 0.525119559 | None | None | N |
E/W | 0.9976 | likely_pathogenic | 0.9966 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/Y | 0.9852 | likely_pathogenic | 0.9799 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.