Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19398 | 58417;58418;58419 | chr2:178594201;178594200;178594199 | chr2:179458928;179458927;179458926 |
N2AB | 17757 | 53494;53495;53496 | chr2:178594201;178594200;178594199 | chr2:179458928;179458927;179458926 |
N2A | 16830 | 50713;50714;50715 | chr2:178594201;178594200;178594199 | chr2:179458928;179458927;179458926 |
N2B | 10333 | 31222;31223;31224 | chr2:178594201;178594200;178594199 | chr2:179458928;179458927;179458926 |
Novex-1 | 10458 | 31597;31598;31599 | chr2:178594201;178594200;178594199 | chr2:179458928;179458927;179458926 |
Novex-2 | 10525 | 31798;31799;31800 | chr2:178594201;178594200;178594199 | chr2:179458928;179458927;179458926 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs375724247 | None | None | N | 0.155 | 0.079 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs375724247 | None | None | N | 0.155 | 0.079 | None | gnomAD-4.0.0 | 3.04509E-06 | None | None | None | None | I | None | 3.49467E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20497E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4335 | ambiguous | 0.3938 | ambiguous | -2.377 | Highly Destabilizing | 0.007 | N | 0.271 | neutral | None | None | None | None | I |
I/C | 0.6454 | likely_pathogenic | 0.6175 | pathogenic | -1.646 | Destabilizing | 0.356 | N | 0.446 | neutral | None | None | None | None | I |
I/D | 0.9554 | likely_pathogenic | 0.9463 | pathogenic | -2.213 | Highly Destabilizing | 0.356 | N | 0.56 | neutral | None | None | None | None | I |
I/E | 0.8932 | likely_pathogenic | 0.8767 | pathogenic | -2.04 | Highly Destabilizing | 0.136 | N | 0.537 | neutral | None | None | None | None | I |
I/F | 0.3611 | ambiguous | 0.3381 | benign | -1.407 | Destabilizing | 0.055 | N | 0.453 | neutral | D | 0.527096364 | None | None | I |
I/G | 0.7957 | likely_pathogenic | 0.7652 | pathogenic | -2.883 | Highly Destabilizing | 0.136 | N | 0.502 | neutral | None | None | None | None | I |
I/H | 0.8717 | likely_pathogenic | 0.8439 | pathogenic | -2.187 | Highly Destabilizing | 0.864 | D | 0.505 | neutral | None | None | None | None | I |
I/K | 0.7979 | likely_pathogenic | 0.7512 | pathogenic | -1.791 | Destabilizing | 0.136 | N | 0.547 | neutral | None | None | None | None | I |
I/L | 0.1489 | likely_benign | 0.1438 | benign | -0.948 | Destabilizing | 0.002 | N | 0.174 | neutral | N | 0.478224982 | None | None | I |
I/M | 0.1653 | likely_benign | 0.1582 | benign | -0.857 | Destabilizing | 0.171 | N | 0.452 | neutral | D | 0.534907771 | None | None | I |
I/N | 0.6996 | likely_pathogenic | 0.6639 | pathogenic | -1.944 | Destabilizing | 0.56 | D | 0.541 | neutral | N | 0.502270236 | None | None | I |
I/P | 0.9547 | likely_pathogenic | 0.9405 | pathogenic | -1.4 | Destabilizing | 0.628 | D | 0.563 | neutral | None | None | None | None | I |
I/Q | 0.7955 | likely_pathogenic | 0.7612 | pathogenic | -1.892 | Destabilizing | 0.628 | D | 0.519 | neutral | None | None | None | None | I |
I/R | 0.7252 | likely_pathogenic | 0.6563 | pathogenic | -1.398 | Destabilizing | 0.356 | N | 0.532 | neutral | None | None | None | None | I |
I/S | 0.5673 | likely_pathogenic | 0.5155 | ambiguous | -2.693 | Highly Destabilizing | 0.055 | N | 0.449 | neutral | D | 0.534907771 | None | None | I |
I/T | 0.3898 | ambiguous | 0.3516 | ambiguous | -2.379 | Highly Destabilizing | 0.012 | N | 0.378 | neutral | D | 0.526402931 | None | None | I |
I/V | 0.0564 | likely_benign | 0.0573 | benign | -1.4 | Destabilizing | None | N | 0.155 | neutral | N | 0.373726816 | None | None | I |
I/W | 0.9506 | likely_pathogenic | 0.9378 | pathogenic | -1.695 | Destabilizing | 0.864 | D | 0.517 | neutral | None | None | None | None | I |
I/Y | 0.8101 | likely_pathogenic | 0.7923 | pathogenic | -1.425 | Destabilizing | 0.356 | N | 0.487 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.