Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19417 | 58474;58475;58476 | chr2:178594144;178594143;178594142 | chr2:179458871;179458870;179458869 |
N2AB | 17776 | 53551;53552;53553 | chr2:178594144;178594143;178594142 | chr2:179458871;179458870;179458869 |
N2A | 16849 | 50770;50771;50772 | chr2:178594144;178594143;178594142 | chr2:179458871;179458870;179458869 |
N2B | 10352 | 31279;31280;31281 | chr2:178594144;178594143;178594142 | chr2:179458871;179458870;179458869 |
Novex-1 | 10477 | 31654;31655;31656 | chr2:178594144;178594143;178594142 | chr2:179458871;179458870;179458869 |
Novex-2 | 10544 | 31855;31856;31857 | chr2:178594144;178594143;178594142 | chr2:179458871;179458870;179458869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs2050890931 | None | 0.134 | N | 0.23 | 0.26 | 0.31291088546 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | I | None | 5.65739E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1598 | likely_benign | 0.1693 | benign | -0.112 | Destabilizing | 0.079 | N | 0.193 | neutral | None | None | None | None | I |
K/C | 0.4665 | ambiguous | 0.5007 | ambiguous | -0.261 | Destabilizing | 0.999 | D | 0.458 | neutral | None | None | None | None | I |
K/D | 0.3425 | ambiguous | 0.3536 | ambiguous | 0.099 | Stabilizing | 0.939 | D | 0.495 | neutral | None | None | None | None | I |
K/E | 0.1097 | likely_benign | 0.1131 | benign | 0.156 | Stabilizing | 0.92 | D | 0.433 | neutral | N | 0.466082404 | None | None | I |
K/F | 0.5542 | ambiguous | 0.5627 | ambiguous | -0.022 | Destabilizing | 0.997 | D | 0.483 | neutral | None | None | None | None | I |
K/G | 0.313 | likely_benign | 0.3376 | benign | -0.397 | Destabilizing | 0.863 | D | 0.439 | neutral | None | None | None | None | I |
K/H | 0.2108 | likely_benign | 0.2104 | benign | -0.653 | Destabilizing | 0.997 | D | 0.471 | neutral | None | None | None | None | I |
K/I | 0.1698 | likely_benign | 0.1671 | benign | 0.583 | Stabilizing | 0.982 | D | 0.489 | neutral | None | None | None | None | I |
K/L | 0.2095 | likely_benign | 0.2142 | benign | 0.583 | Stabilizing | 0.939 | D | 0.477 | neutral | None | None | None | None | I |
K/M | 0.1369 | likely_benign | 0.1477 | benign | 0.263 | Stabilizing | 0.996 | D | 0.479 | neutral | D | 0.523517341 | None | None | I |
K/N | 0.2272 | likely_benign | 0.2264 | benign | 0.023 | Stabilizing | 0.92 | D | 0.486 | neutral | D | 0.522477191 | None | None | I |
K/P | 0.8282 | likely_pathogenic | 0.8495 | pathogenic | 0.382 | Stabilizing | 0.969 | D | 0.51 | neutral | None | None | None | None | I |
K/Q | 0.1002 | likely_benign | 0.099 | benign | -0.073 | Destabilizing | 0.988 | D | 0.491 | neutral | N | 0.495578591 | None | None | I |
K/R | 0.0785 | likely_benign | 0.0806 | benign | -0.236 | Destabilizing | 0.959 | D | 0.453 | neutral | N | 0.499138972 | None | None | I |
K/S | 0.1981 | likely_benign | 0.2096 | benign | -0.507 | Destabilizing | 0.373 | N | 0.177 | neutral | None | None | None | None | I |
K/T | 0.0763 | likely_benign | 0.0797 | benign | -0.274 | Destabilizing | 0.134 | N | 0.23 | neutral | N | 0.441880179 | None | None | I |
K/V | 0.1405 | likely_benign | 0.1421 | benign | 0.382 | Stabilizing | 0.939 | D | 0.467 | neutral | None | None | None | None | I |
K/W | 0.6431 | likely_pathogenic | 0.6661 | pathogenic | 0.005 | Stabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | I |
K/Y | 0.4838 | ambiguous | 0.4999 | ambiguous | 0.317 | Stabilizing | 0.997 | D | 0.495 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.