Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19433 | 58522;58523;58524 | chr2:178594096;178594095;178594094 | chr2:179458823;179458822;179458821 |
N2AB | 17792 | 53599;53600;53601 | chr2:178594096;178594095;178594094 | chr2:179458823;179458822;179458821 |
N2A | 16865 | 50818;50819;50820 | chr2:178594096;178594095;178594094 | chr2:179458823;179458822;179458821 |
N2B | 10368 | 31327;31328;31329 | chr2:178594096;178594095;178594094 | chr2:179458823;179458822;179458821 |
Novex-1 | 10493 | 31702;31703;31704 | chr2:178594096;178594095;178594094 | chr2:179458823;179458822;179458821 |
Novex-2 | 10560 | 31903;31904;31905 | chr2:178594096;178594095;178594094 | chr2:179458823;179458822;179458821 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.78 | N | 0.554 | 0.139 | 0.338834610459 | gnomAD-4.0.0 | 2.05301E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1348 | likely_benign | 0.1383 | benign | -0.699 | Destabilizing | 0.78 | D | 0.554 | neutral | N | 0.486977751 | None | None | N |
T/C | 0.3045 | likely_benign | 0.3317 | benign | -0.648 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/D | 0.5834 | likely_pathogenic | 0.5346 | ambiguous | -1.813 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/E | 0.5675 | likely_pathogenic | 0.5122 | ambiguous | -1.686 | Destabilizing | 0.996 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/F | 0.3162 | likely_benign | 0.3239 | benign | -0.395 | Destabilizing | 0.976 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/G | 0.3661 | ambiguous | 0.3638 | ambiguous | -1.066 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/H | 0.4255 | ambiguous | 0.4071 | ambiguous | -1.447 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/I | 0.1466 | likely_benign | 0.1506 | benign | 0.233 | Stabilizing | 0.011 | N | 0.338 | neutral | N | 0.404340512 | None | None | N |
T/K | 0.5489 | ambiguous | 0.4756 | ambiguous | -0.909 | Destabilizing | 0.988 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/L | 0.1239 | likely_benign | 0.1248 | benign | 0.233 | Stabilizing | 0.702 | D | 0.514 | neutral | None | None | None | None | N |
T/M | 0.1177 | likely_benign | 0.1189 | benign | 0.384 | Stabilizing | 0.976 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/N | 0.1949 | likely_benign | 0.1874 | benign | -1.45 | Destabilizing | 0.995 | D | 0.616 | neutral | N | 0.487365078 | None | None | N |
T/P | 0.6964 | likely_pathogenic | 0.6583 | pathogenic | -0.045 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | N | 0.487365078 | None | None | N |
T/Q | 0.4623 | ambiguous | 0.4249 | ambiguous | -1.333 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
T/R | 0.4545 | ambiguous | 0.3908 | ambiguous | -0.984 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/S | 0.1557 | likely_benign | 0.1594 | benign | -1.461 | Destabilizing | 0.946 | D | 0.558 | neutral | N | 0.513894993 | None | None | N |
T/V | 0.1421 | likely_benign | 0.1498 | benign | -0.045 | Destabilizing | 0.507 | D | 0.437 | neutral | None | None | None | None | N |
T/W | 0.6486 | likely_pathogenic | 0.6248 | pathogenic | -0.661 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/Y | 0.3464 | ambiguous | 0.3421 | ambiguous | -0.296 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.