Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19434 | 58525;58526;58527 | chr2:178594093;178594092;178594091 | chr2:179458820;179458819;179458818 |
N2AB | 17793 | 53602;53603;53604 | chr2:178594093;178594092;178594091 | chr2:179458820;179458819;179458818 |
N2A | 16866 | 50821;50822;50823 | chr2:178594093;178594092;178594091 | chr2:179458820;179458819;179458818 |
N2B | 10369 | 31330;31331;31332 | chr2:178594093;178594092;178594091 | chr2:179458820;179458819;179458818 |
Novex-1 | 10494 | 31705;31706;31707 | chr2:178594093;178594092;178594091 | chr2:179458820;179458819;179458818 |
Novex-2 | 10561 | 31906;31907;31908 | chr2:178594093;178594092;178594091 | chr2:179458820;179458819;179458818 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs770789921 | -1.006 | 0.003 | N | 0.307 | 0.102 | 0.287603790349 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/D | rs770789921 | -1.006 | 0.003 | N | 0.307 | 0.102 | 0.287603790349 | gnomAD-4.0.0 | 4.77572E-06 | None | None | None | None | N | None | 0 | 4.57582E-05 | None | 0 | 0 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1395 | likely_benign | 0.1472 | benign | -0.686 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
H/C | 0.0948 | likely_benign | 0.0935 | benign | 0.092 | Stabilizing | 0.497 | N | 0.479 | neutral | None | None | None | None | N |
H/D | 0.1559 | likely_benign | 0.1676 | benign | -0.445 | Destabilizing | 0.003 | N | 0.307 | neutral | N | 0.462658096 | None | None | N |
H/E | 0.1591 | likely_benign | 0.1667 | benign | -0.367 | Destabilizing | None | N | 0.097 | neutral | None | None | None | None | N |
H/F | 0.1954 | likely_benign | 0.2218 | benign | 0.211 | Stabilizing | None | N | 0.195 | neutral | None | None | None | None | N |
H/G | 0.1853 | likely_benign | 0.2012 | benign | -1.026 | Destabilizing | None | N | 0.217 | neutral | None | None | None | None | N |
H/I | 0.1271 | likely_benign | 0.1407 | benign | 0.241 | Stabilizing | 0.044 | N | 0.547 | neutral | None | None | None | None | N |
H/K | 0.0991 | likely_benign | 0.1011 | benign | -0.545 | Destabilizing | None | N | 0.145 | neutral | None | None | None | None | N |
H/L | 0.0749 | likely_benign | 0.0774 | benign | 0.241 | Stabilizing | 0.003 | N | 0.387 | neutral | N | 0.454038613 | None | None | N |
H/M | 0.2306 | likely_benign | 0.2554 | benign | 0.168 | Stabilizing | 0.245 | N | 0.474 | neutral | None | None | None | None | N |
H/N | 0.0788 | likely_benign | 0.0918 | benign | -0.458 | Destabilizing | None | N | 0.111 | neutral | N | 0.418077813 | None | None | N |
H/P | 0.5155 | ambiguous | 0.5122 | ambiguous | -0.047 | Destabilizing | 0.028 | N | 0.484 | neutral | N | 0.489922056 | None | None | N |
H/Q | 0.086 | likely_benign | 0.0982 | benign | -0.25 | Destabilizing | None | N | 0.133 | neutral | N | 0.405591305 | None | None | N |
H/R | 0.0532 | likely_benign | 0.0531 | benign | -0.964 | Destabilizing | 0.007 | N | 0.278 | neutral | N | 0.426697296 | None | None | N |
H/S | 0.1204 | likely_benign | 0.1316 | benign | -0.517 | Destabilizing | 0.002 | N | 0.301 | neutral | None | None | None | None | N |
H/T | 0.1058 | likely_benign | 0.1169 | benign | -0.346 | Destabilizing | 0.008 | N | 0.367 | neutral | None | None | None | None | N |
H/V | 0.1064 | likely_benign | 0.113 | benign | -0.047 | Destabilizing | 0.018 | N | 0.395 | neutral | None | None | None | None | N |
H/W | 0.2411 | likely_benign | 0.2422 | benign | 0.36 | Stabilizing | 0.497 | N | 0.441 | neutral | None | None | None | None | N |
H/Y | 0.0885 | likely_benign | 0.0966 | benign | 0.589 | Stabilizing | 0.007 | N | 0.345 | neutral | N | 0.482284007 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.