Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19441 | 58546;58547;58548 | chr2:178594072;178594071;178594070 | chr2:179458799;179458798;179458797 |
N2AB | 17800 | 53623;53624;53625 | chr2:178594072;178594071;178594070 | chr2:179458799;179458798;179458797 |
N2A | 16873 | 50842;50843;50844 | chr2:178594072;178594071;178594070 | chr2:179458799;179458798;179458797 |
N2B | 10376 | 31351;31352;31353 | chr2:178594072;178594071;178594070 | chr2:179458799;179458798;179458797 |
Novex-1 | 10501 | 31726;31727;31728 | chr2:178594072;178594071;178594070 | chr2:179458799;179458798;179458797 |
Novex-2 | 10568 | 31927;31928;31929 | chr2:178594072;178594071;178594070 | chr2:179458799;179458798;179458797 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.98 | N | 0.475 | 0.251 | 0.444505407614 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0884 | likely_benign | 0.0874 | benign | -0.915 | Destabilizing | 0.98 | D | 0.475 | neutral | N | 0.507142379 | None | None | N |
T/C | 0.3635 | ambiguous | 0.3394 | benign | -0.538 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
T/D | 0.4333 | ambiguous | 0.4433 | ambiguous | -0.409 | Destabilizing | 0.942 | D | 0.563 | neutral | None | None | None | None | N |
T/E | 0.3232 | likely_benign | 0.336 | benign | -0.364 | Destabilizing | 0.97 | D | 0.573 | neutral | None | None | None | None | N |
T/F | 0.1562 | likely_benign | 0.1521 | benign | -0.843 | Destabilizing | 0.996 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/G | 0.2678 | likely_benign | 0.2617 | benign | -1.222 | Destabilizing | 0.97 | D | 0.635 | neutral | None | None | None | None | N |
T/H | 0.2235 | likely_benign | 0.2154 | benign | -1.5 | Destabilizing | 0.092 | N | 0.436 | neutral | None | None | None | None | N |
T/I | 0.1402 | likely_benign | 0.1396 | benign | -0.173 | Destabilizing | 0.998 | D | 0.634 | neutral | D | 0.523053194 | None | None | N |
T/K | 0.2325 | likely_benign | 0.2512 | benign | -0.722 | Destabilizing | 0.961 | D | 0.559 | neutral | N | 0.509142534 | None | None | N |
T/L | 0.0938 | likely_benign | 0.0943 | benign | -0.173 | Destabilizing | 0.985 | D | 0.575 | neutral | None | None | None | None | N |
T/M | 0.0816 | likely_benign | 0.0792 | benign | 0.085 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
T/N | 0.1266 | likely_benign | 0.1315 | benign | -0.796 | Destabilizing | 0.304 | N | 0.314 | neutral | None | None | None | None | N |
T/P | 0.6619 | likely_pathogenic | 0.7461 | pathogenic | -0.387 | Destabilizing | 0.998 | D | 0.633 | neutral | D | 0.535387773 | None | None | N |
T/Q | 0.2337 | likely_benign | 0.2367 | benign | -0.886 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | N |
T/R | 0.1977 | likely_benign | 0.2103 | benign | -0.592 | Destabilizing | 0.989 | D | 0.579 | neutral | N | 0.476280755 | None | None | N |
T/S | 0.0996 | likely_benign | 0.0984 | benign | -1.083 | Destabilizing | 0.961 | D | 0.489 | neutral | N | 0.459311147 | None | None | N |
T/V | 0.1126 | likely_benign | 0.105 | benign | -0.387 | Destabilizing | 0.995 | D | 0.492 | neutral | None | None | None | None | N |
T/W | 0.5636 | ambiguous | 0.5618 | ambiguous | -0.804 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/Y | 0.2014 | likely_benign | 0.2097 | benign | -0.554 | Destabilizing | 0.991 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.