Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19445 | 58558;58559;58560 | chr2:178594060;178594059;178594058 | chr2:179458787;179458786;179458785 |
N2AB | 17804 | 53635;53636;53637 | chr2:178594060;178594059;178594058 | chr2:179458787;179458786;179458785 |
N2A | 16877 | 50854;50855;50856 | chr2:178594060;178594059;178594058 | chr2:179458787;179458786;179458785 |
N2B | 10380 | 31363;31364;31365 | chr2:178594060;178594059;178594058 | chr2:179458787;179458786;179458785 |
Novex-1 | 10505 | 31738;31739;31740 | chr2:178594060;178594059;178594058 | chr2:179458787;179458786;179458785 |
Novex-2 | 10572 | 31939;31940;31941 | chr2:178594060;178594059;178594058 | chr2:179458787;179458786;179458785 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1418076473 | 1.483 | 0.081 | N | 0.562 | 0.167 | 0.307016933798 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/K | rs1418076473 | 1.483 | 0.081 | N | 0.562 | 0.167 | 0.307016933798 | gnomAD-4.0.0 | 4.79018E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29684E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2555 | likely_benign | 0.1939 | benign | -0.782 | Destabilizing | 0.019 | N | 0.581 | neutral | N | 0.518378093 | None | None | N |
E/C | 0.8114 | likely_pathogenic | 0.7313 | pathogenic | -0.601 | Destabilizing | 0.958 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/D | 0.2959 | likely_benign | 0.2871 | benign | -1.426 | Destabilizing | 0.042 | N | 0.482 | neutral | N | 0.500659124 | None | None | N |
E/F | 0.7888 | likely_pathogenic | 0.7107 | pathogenic | -0.245 | Destabilizing | 0.667 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/G | 0.2296 | likely_benign | 0.1691 | benign | -1.193 | Destabilizing | None | N | 0.421 | neutral | N | 0.451366454 | None | None | N |
E/H | 0.4552 | ambiguous | 0.3748 | ambiguous | -0.774 | Destabilizing | 0.667 | D | 0.643 | neutral | None | None | None | None | N |
E/I | 0.4173 | ambiguous | 0.33 | benign | 0.356 | Stabilizing | 0.124 | N | 0.7 | prob.neutral | None | None | None | None | N |
E/K | 0.2052 | likely_benign | 0.1621 | benign | -1.178 | Destabilizing | 0.081 | N | 0.562 | neutral | N | 0.456425557 | None | None | N |
E/L | 0.4603 | ambiguous | 0.3649 | ambiguous | 0.356 | Stabilizing | 0.055 | N | 0.641 | neutral | None | None | None | None | N |
E/M | 0.5293 | ambiguous | 0.4277 | ambiguous | 0.877 | Stabilizing | 0.667 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/N | 0.3978 | ambiguous | 0.3349 | benign | -1.539 | Destabilizing | 0.002 | N | 0.341 | neutral | None | None | None | None | N |
E/P | 0.9692 | likely_pathogenic | 0.9455 | pathogenic | -0.002 | Destabilizing | 0.364 | N | 0.641 | neutral | None | None | None | None | N |
E/Q | 0.1257 | likely_benign | 0.1076 | benign | -1.32 | Destabilizing | 0.301 | N | 0.593 | neutral | N | 0.449942302 | None | None | N |
E/R | 0.2875 | likely_benign | 0.2175 | benign | -0.967 | Destabilizing | 0.22 | N | 0.617 | neutral | None | None | None | None | N |
E/S | 0.2672 | likely_benign | 0.2118 | benign | -1.937 | Destabilizing | 0.005 | N | 0.303 | neutral | None | None | None | None | N |
E/T | 0.2556 | likely_benign | 0.1919 | benign | -1.6 | Destabilizing | None | N | 0.4 | neutral | None | None | None | None | N |
E/V | 0.2502 | likely_benign | 0.2036 | benign | -0.002 | Destabilizing | 0.042 | N | 0.634 | neutral | N | 0.440994745 | None | None | N |
E/W | 0.8686 | likely_pathogenic | 0.8057 | pathogenic | -0.163 | Destabilizing | 0.958 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.6344 | likely_pathogenic | 0.5395 | ambiguous | -0.072 | Destabilizing | 0.667 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.