Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19454 | 58585;58586;58587 | chr2:178594033;178594032;178594031 | chr2:179458760;179458759;179458758 |
N2AB | 17813 | 53662;53663;53664 | chr2:178594033;178594032;178594031 | chr2:179458760;179458759;179458758 |
N2A | 16886 | 50881;50882;50883 | chr2:178594033;178594032;178594031 | chr2:179458760;179458759;179458758 |
N2B | 10389 | 31390;31391;31392 | chr2:178594033;178594032;178594031 | chr2:179458760;179458759;179458758 |
Novex-1 | 10514 | 31765;31766;31767 | chr2:178594033;178594032;178594031 | chr2:179458760;179458759;179458758 |
Novex-2 | 10581 | 31966;31967;31968 | chr2:178594033;178594032;178594031 | chr2:179458760;179458759;179458758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.991 | D | 0.795 | 0.629 | 0.382761230579 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1069 | likely_benign | 0.1074 | benign | -0.883 | Destabilizing | 0.76 | D | 0.399 | neutral | N | 0.482092006 | None | None | N |
S/C | 0.1497 | likely_benign | 0.1474 | benign | -0.768 | Destabilizing | 0.999 | D | 0.78 | deleterious | N | 0.515450194 | None | None | N |
S/D | 0.7843 | likely_pathogenic | 0.744 | pathogenic | -0.771 | Destabilizing | 0.953 | D | 0.518 | neutral | None | None | None | None | N |
S/E | 0.8231 | likely_pathogenic | 0.7964 | pathogenic | -0.769 | Destabilizing | 0.953 | D | 0.515 | neutral | None | None | None | None | N |
S/F | 0.537 | ambiguous | 0.5112 | ambiguous | -1.284 | Destabilizing | 0.991 | D | 0.859 | deleterious | D | 0.52655301 | None | None | N |
S/G | 0.0992 | likely_benign | 0.0932 | benign | -1.102 | Destabilizing | 0.953 | D | 0.447 | neutral | None | None | None | None | N |
S/H | 0.6168 | likely_pathogenic | 0.5973 | pathogenic | -1.604 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
S/I | 0.485 | ambiguous | 0.4745 | ambiguous | -0.402 | Destabilizing | 0.986 | D | 0.825 | deleterious | None | None | None | None | N |
S/K | 0.8477 | likely_pathogenic | 0.8246 | pathogenic | -0.698 | Destabilizing | 0.953 | D | 0.516 | neutral | None | None | None | None | N |
S/L | 0.2611 | likely_benign | 0.2504 | benign | -0.402 | Destabilizing | 0.91 | D | 0.637 | neutral | None | None | None | None | N |
S/M | 0.3645 | ambiguous | 0.3533 | ambiguous | 0.027 | Stabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
S/N | 0.3271 | likely_benign | 0.3122 | benign | -0.808 | Destabilizing | 0.953 | D | 0.52 | neutral | None | None | None | None | N |
S/P | 0.9287 | likely_pathogenic | 0.9124 | pathogenic | -0.531 | Destabilizing | 0.991 | D | 0.795 | deleterious | D | 0.53782041 | None | None | N |
S/Q | 0.7154 | likely_pathogenic | 0.7002 | pathogenic | -1.042 | Destabilizing | 0.993 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/R | 0.7315 | likely_pathogenic | 0.6898 | pathogenic | -0.529 | Destabilizing | 0.986 | D | 0.805 | deleterious | None | None | None | None | N |
S/T | 0.0955 | likely_benign | 0.0872 | benign | -0.801 | Destabilizing | 0.046 | N | 0.371 | neutral | N | 0.520919753 | None | None | N |
S/V | 0.4543 | ambiguous | 0.4419 | ambiguous | -0.531 | Destabilizing | 0.973 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/W | 0.7089 | likely_pathogenic | 0.6895 | pathogenic | -1.238 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
S/Y | 0.5086 | ambiguous | 0.4848 | ambiguous | -0.945 | Destabilizing | 0.997 | D | 0.851 | deleterious | D | 0.538073899 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.