Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19491 | 58696;58697;58698 | chr2:178593829;178593828;178593827 | chr2:179458556;179458555;179458554 |
N2AB | 17850 | 53773;53774;53775 | chr2:178593829;178593828;178593827 | chr2:179458556;179458555;179458554 |
N2A | 16923 | 50992;50993;50994 | chr2:178593829;178593828;178593827 | chr2:179458556;179458555;179458554 |
N2B | 10426 | 31501;31502;31503 | chr2:178593829;178593828;178593827 | chr2:179458556;179458555;179458554 |
Novex-1 | 10551 | 31876;31877;31878 | chr2:178593829;178593828;178593827 | chr2:179458556;179458555;179458554 |
Novex-2 | 10618 | 32077;32078;32079 | chr2:178593829;178593828;178593827 | chr2:179458556;179458555;179458554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs2050771375 | None | 1.0 | N | 0.7 | 0.603 | 0.556695477184 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
E/V | rs2050771375 | None | 1.0 | N | 0.7 | 0.603 | 0.556695477184 | gnomAD-4.0.0 | 6.57851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2837 | likely_benign | 0.2937 | benign | -0.716 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.496951523 | None | None | N |
E/C | 0.9162 | likely_pathogenic | 0.9243 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
E/D | 0.1825 | likely_benign | 0.1971 | benign | -0.973 | Destabilizing | 0.999 | D | 0.429 | neutral | N | 0.473266587 | None | None | N |
E/F | 0.8883 | likely_pathogenic | 0.9045 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/G | 0.4172 | ambiguous | 0.4569 | ambiguous | -1.063 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.469673718 | None | None | N |
E/H | 0.6758 | likely_pathogenic | 0.6936 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.59 | neutral | None | None | None | None | N |
E/I | 0.5908 | likely_pathogenic | 0.6049 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/K | 0.3161 | likely_benign | 0.3417 | ambiguous | -0.563 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.484018991 | None | None | N |
E/L | 0.6582 | likely_pathogenic | 0.6856 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/M | 0.6293 | likely_pathogenic | 0.6478 | pathogenic | 0.459 | Stabilizing | 1.0 | D | 0.572 | neutral | None | None | None | None | N |
E/N | 0.439 | ambiguous | 0.4718 | ambiguous | -1.085 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/P | 0.9887 | likely_pathogenic | 0.9904 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/Q | 0.2743 | likely_benign | 0.2938 | benign | -0.936 | Destabilizing | 1.0 | D | 0.625 | neutral | N | 0.488791931 | None | None | N |
E/R | 0.5069 | ambiguous | 0.5277 | ambiguous | -0.167 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/S | 0.3584 | ambiguous | 0.3845 | ambiguous | -1.337 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
E/T | 0.3649 | ambiguous | 0.3845 | ambiguous | -1.05 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/V | 0.3994 | ambiguous | 0.4075 | ambiguous | -0.066 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.500148236 | None | None | N |
E/W | 0.967 | likely_pathogenic | 0.9713 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
E/Y | 0.8099 | likely_pathogenic | 0.831 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.