Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19551 | 58876;58877;58878 | chr2:178593649;178593648;178593647 | chr2:179458376;179458375;179458374 |
N2AB | 17910 | 53953;53954;53955 | chr2:178593649;178593648;178593647 | chr2:179458376;179458375;179458374 |
N2A | 16983 | 51172;51173;51174 | chr2:178593649;178593648;178593647 | chr2:179458376;179458375;179458374 |
N2B | 10486 | 31681;31682;31683 | chr2:178593649;178593648;178593647 | chr2:179458376;179458375;179458374 |
Novex-1 | 10611 | 32056;32057;32058 | chr2:178593649;178593648;178593647 | chr2:179458376;179458375;179458374 |
Novex-2 | 10678 | 32257;32258;32259 | chr2:178593649;178593648;178593647 | chr2:179458376;179458375;179458374 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1264084790 | None | 0.001 | N | 0.237 | 0.06 | 0.302793454619 | gnomAD-4.0.0 | 3.18563E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57569E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3684 | ambiguous | 0.3072 | benign | -2.144 | Highly Destabilizing | 0.218 | N | 0.647 | neutral | None | None | None | None | N |
I/C | 0.581 | likely_pathogenic | 0.5199 | ambiguous | -1.202 | Destabilizing | 0.973 | D | 0.675 | prob.neutral | None | None | None | None | N |
I/D | 0.7395 | likely_pathogenic | 0.6526 | pathogenic | -2.229 | Highly Destabilizing | 0.826 | D | 0.703 | prob.neutral | None | None | None | None | N |
I/E | 0.503 | ambiguous | 0.4579 | ambiguous | -1.984 | Destabilizing | 0.404 | N | 0.679 | prob.neutral | None | None | None | None | N |
I/F | 0.2301 | likely_benign | 0.1893 | benign | -1.171 | Destabilizing | 0.782 | D | 0.643 | neutral | N | 0.44696542 | None | None | N |
I/G | 0.7156 | likely_pathogenic | 0.6261 | pathogenic | -2.697 | Highly Destabilizing | 0.826 | D | 0.68 | prob.neutral | None | None | None | None | N |
I/H | 0.4961 | ambiguous | 0.4289 | ambiguous | -2.234 | Highly Destabilizing | 0.973 | D | 0.749 | deleterious | None | None | None | None | N |
I/K | 0.3966 | ambiguous | 0.3406 | ambiguous | -1.406 | Destabilizing | 0.704 | D | 0.676 | prob.neutral | None | None | None | None | N |
I/L | 0.1136 | likely_benign | 0.1001 | benign | -0.544 | Destabilizing | 0.084 | N | 0.487 | neutral | N | 0.450120369 | None | None | N |
I/M | 0.116 | likely_benign | 0.1039 | benign | -0.498 | Destabilizing | 0.782 | D | 0.652 | neutral | N | 0.475152099 | None | None | N |
I/N | 0.323 | likely_benign | 0.2589 | benign | -1.766 | Destabilizing | 0.782 | D | 0.727 | prob.delet. | N | 0.467953981 | None | None | N |
I/P | 0.9686 | likely_pathogenic | 0.9607 | pathogenic | -1.058 | Destabilizing | 0.906 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/Q | 0.3651 | ambiguous | 0.3293 | benign | -1.569 | Destabilizing | 0.04 | N | 0.623 | neutral | None | None | None | None | N |
I/R | 0.3277 | likely_benign | 0.2728 | benign | -1.303 | Destabilizing | 0.704 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/S | 0.2771 | likely_benign | 0.2351 | benign | -2.465 | Highly Destabilizing | 0.782 | D | 0.658 | neutral | N | 0.448925503 | None | None | N |
I/T | 0.1959 | likely_benign | 0.1748 | benign | -2.074 | Highly Destabilizing | 0.505 | D | 0.629 | neutral | N | 0.454349965 | None | None | N |
I/V | 0.0782 | likely_benign | 0.0695 | benign | -1.058 | Destabilizing | 0.001 | N | 0.237 | neutral | N | 0.411735339 | None | None | N |
I/W | 0.8427 | likely_pathogenic | 0.7963 | pathogenic | -1.59 | Destabilizing | 0.991 | D | 0.752 | deleterious | None | None | None | None | N |
I/Y | 0.5188 | ambiguous | 0.4601 | ambiguous | -1.244 | Destabilizing | 0.906 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.