Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19555 | 58888;58889;58890 | chr2:178593637;178593636;178593635 | chr2:179458364;179458363;179458362 |
N2AB | 17914 | 53965;53966;53967 | chr2:178593637;178593636;178593635 | chr2:179458364;179458363;179458362 |
N2A | 16987 | 51184;51185;51186 | chr2:178593637;178593636;178593635 | chr2:179458364;179458363;179458362 |
N2B | 10490 | 31693;31694;31695 | chr2:178593637;178593636;178593635 | chr2:179458364;179458363;179458362 |
Novex-1 | 10615 | 32068;32069;32070 | chr2:178593637;178593636;178593635 | chr2:179458364;179458363;179458362 |
Novex-2 | 10682 | 32269;32270;32271 | chr2:178593637;178593636;178593635 | chr2:179458364;179458363;179458362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | None | N | 0.236 | 0.195 | 0.0716867268079 | gnomAD-4.0.0 | 1.59301E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
H/Y | rs1289211242 | 0.178 | None | N | 0.158 | 0.144 | 0.0716867268079 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
H/Y | rs1289211242 | 0.178 | None | N | 0.158 | 0.144 | 0.0716867268079 | gnomAD-4.0.0 | 6.84543E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3943 | ambiguous | 0.3796 | ambiguous | -1.807 | Destabilizing | 0.015 | N | 0.663 | neutral | None | None | None | None | N |
H/C | 0.1158 | likely_benign | 0.1098 | benign | -1.053 | Destabilizing | None | N | 0.589 | neutral | None | None | None | None | N |
H/D | 0.5913 | likely_pathogenic | 0.5462 | ambiguous | -1.682 | Destabilizing | 0.111 | N | 0.709 | prob.delet. | N | 0.418874742 | None | None | N |
H/E | 0.5719 | likely_pathogenic | 0.5483 | ambiguous | -1.506 | Destabilizing | 0.033 | N | 0.531 | neutral | None | None | None | None | N |
H/F | 0.1924 | likely_benign | 0.1626 | benign | 0.138 | Stabilizing | 0.033 | N | 0.68 | prob.neutral | None | None | None | None | N |
H/G | 0.5199 | ambiguous | 0.4875 | ambiguous | -2.195 | Highly Destabilizing | 0.064 | N | 0.708 | prob.delet. | None | None | None | None | N |
H/I | 0.495 | ambiguous | 0.471 | ambiguous | -0.66 | Destabilizing | 0.033 | N | 0.702 | prob.neutral | None | None | None | None | N |
H/K | 0.4209 | ambiguous | 0.4063 | ambiguous | -1.502 | Destabilizing | 0.033 | N | 0.681 | prob.neutral | None | None | None | None | N |
H/L | 0.1883 | likely_benign | 0.178 | benign | -0.66 | Destabilizing | 0.005 | N | 0.704 | prob.neutral | N | 0.356402131 | None | None | N |
H/M | 0.4363 | ambiguous | 0.4284 | ambiguous | -0.879 | Destabilizing | 0.003 | N | 0.492 | neutral | None | None | None | None | N |
H/N | 0.2074 | likely_benign | 0.1927 | benign | -1.897 | Destabilizing | 0.049 | N | 0.512 | neutral | N | 0.418874742 | None | None | N |
H/P | 0.9392 | likely_pathogenic | 0.9306 | pathogenic | -1.032 | Destabilizing | 0.202 | N | 0.717 | prob.delet. | N | 0.438153936 | None | None | N |
H/Q | 0.2575 | likely_benign | 0.2315 | benign | -1.459 | Destabilizing | 0.111 | N | 0.557 | neutral | N | 0.375523822 | None | None | N |
H/R | 0.1776 | likely_benign | 0.1608 | benign | -1.878 | Destabilizing | None | N | 0.236 | neutral | N | 0.302124929 | None | None | N |
H/S | 0.2434 | likely_benign | 0.2228 | benign | -1.991 | Destabilizing | 0.064 | N | 0.675 | neutral | None | None | None | None | N |
H/T | 0.391 | ambiguous | 0.3583 | ambiguous | -1.713 | Destabilizing | 0.064 | N | 0.705 | prob.neutral | None | None | None | None | N |
H/V | 0.3784 | ambiguous | 0.3617 | ambiguous | -1.032 | Destabilizing | 0.015 | N | 0.699 | prob.neutral | None | None | None | None | N |
H/W | 0.3464 | ambiguous | 0.336 | benign | 0.574 | Stabilizing | 0.54 | D | 0.714 | prob.delet. | None | None | None | None | N |
H/Y | 0.0812 | likely_benign | 0.0714 | benign | 0.384 | Stabilizing | None | N | 0.158 | neutral | N | 0.314920868 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.