Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19589 | 58990;58991;58992 | chr2:178593443;178593442;178593441 | chr2:179458170;179458169;179458168 |
N2AB | 17948 | 54067;54068;54069 | chr2:178593443;178593442;178593441 | chr2:179458170;179458169;179458168 |
N2A | 17021 | 51286;51287;51288 | chr2:178593443;178593442;178593441 | chr2:179458170;179458169;179458168 |
N2B | 10524 | 31795;31796;31797 | chr2:178593443;178593442;178593441 | chr2:179458170;179458169;179458168 |
Novex-1 | 10649 | 32170;32171;32172 | chr2:178593443;178593442;178593441 | chr2:179458170;179458169;179458168 |
Novex-2 | 10716 | 32371;32372;32373 | chr2:178593443;178593442;178593441 | chr2:179458170;179458169;179458168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.001 | N | 0.149 | 0.192 | 0.273938319068 | gnomAD-4.0.0 | 1.36923E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79928E-05 | 0 | 0 |
T/R | None | None | 0.473 | N | 0.353 | 0.234 | 0.344483371355 | gnomAD-4.0.0 | 6.84614E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.1632E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0998 | likely_benign | 0.0982 | benign | -0.515 | Destabilizing | 0.425 | N | 0.257 | neutral | N | 0.51234505 | None | None | N |
T/C | 0.4151 | ambiguous | 0.4371 | ambiguous | -0.363 | Destabilizing | 0.995 | D | 0.391 | neutral | None | None | None | None | N |
T/D | 0.3892 | ambiguous | 0.4092 | ambiguous | 0.291 | Stabilizing | 0.704 | D | 0.341 | neutral | None | None | None | None | N |
T/E | 0.2644 | likely_benign | 0.2819 | benign | 0.262 | Stabilizing | 0.329 | N | 0.341 | neutral | None | None | None | None | N |
T/F | 0.2792 | likely_benign | 0.2825 | benign | -0.698 | Destabilizing | 0.893 | D | 0.457 | neutral | None | None | None | None | N |
T/G | 0.239 | likely_benign | 0.2424 | benign | -0.729 | Destabilizing | 0.704 | D | 0.373 | neutral | None | None | None | None | N |
T/H | 0.2496 | likely_benign | 0.2634 | benign | -0.963 | Destabilizing | 0.981 | D | 0.417 | neutral | None | None | None | None | N |
T/I | 0.1956 | likely_benign | 0.1955 | benign | -0.054 | Destabilizing | 0.473 | N | 0.345 | neutral | N | 0.510112822 | None | None | N |
T/K | 0.1779 | likely_benign | 0.1876 | benign | -0.479 | Destabilizing | 0.001 | N | 0.149 | neutral | N | 0.460934795 | None | None | N |
T/L | 0.1083 | likely_benign | 0.1089 | benign | -0.054 | Destabilizing | 0.003 | N | 0.141 | neutral | None | None | None | None | N |
T/M | 0.0925 | likely_benign | 0.0898 | benign | 0.054 | Stabilizing | 0.893 | D | 0.423 | neutral | None | None | None | None | N |
T/N | 0.1408 | likely_benign | 0.1438 | benign | -0.338 | Destabilizing | 0.704 | D | 0.28 | neutral | None | None | None | None | N |
T/P | 0.5368 | ambiguous | 0.5173 | ambiguous | -0.176 | Destabilizing | 0.784 | D | 0.421 | neutral | N | 0.483071166 | None | None | N |
T/Q | 0.1918 | likely_benign | 0.2093 | benign | -0.501 | Destabilizing | 0.704 | D | 0.423 | neutral | None | None | None | None | N |
T/R | 0.1778 | likely_benign | 0.1807 | benign | -0.253 | Destabilizing | 0.473 | N | 0.353 | neutral | N | 0.51523064 | None | None | N |
T/S | 0.1098 | likely_benign | 0.1159 | benign | -0.632 | Destabilizing | 0.425 | N | 0.347 | neutral | N | 0.425280639 | None | None | N |
T/V | 0.1448 | likely_benign | 0.1466 | benign | -0.176 | Destabilizing | 0.329 | N | 0.325 | neutral | None | None | None | None | N |
T/W | 0.5835 | likely_pathogenic | 0.5911 | pathogenic | -0.657 | Destabilizing | 0.995 | D | 0.434 | neutral | None | None | None | None | N |
T/Y | 0.3069 | likely_benign | 0.3241 | benign | -0.405 | Destabilizing | 0.981 | D | 0.449 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.