Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19590 | 58993;58994;58995 | chr2:178593440;178593439;178593438 | chr2:179458167;179458166;179458165 |
N2AB | 17949 | 54070;54071;54072 | chr2:178593440;178593439;178593438 | chr2:179458167;179458166;179458165 |
N2A | 17022 | 51289;51290;51291 | chr2:178593440;178593439;178593438 | chr2:179458167;179458166;179458165 |
N2B | 10525 | 31798;31799;31800 | chr2:178593440;178593439;178593438 | chr2:179458167;179458166;179458165 |
Novex-1 | 10650 | 32173;32174;32175 | chr2:178593440;178593439;178593438 | chr2:179458167;179458166;179458165 |
Novex-2 | 10717 | 32374;32375;32376 | chr2:178593440;178593439;178593438 | chr2:179458167;179458166;179458165 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs2050672836 | None | 0.026 | N | 0.263 | 0.19 | 0.298056030225 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85995E-06 | 0 | 0 |
E/Q | None | None | 0.984 | D | 0.553 | 0.255 | 0.424073947737 | gnomAD-4.0.0 | 1.59333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4381E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.215 | likely_benign | 0.189 | benign | -0.594 | Destabilizing | 0.026 | N | 0.263 | neutral | N | 0.475402815 | None | None | N |
E/C | 0.8957 | likely_pathogenic | 0.8939 | pathogenic | -0.188 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/D | 0.1042 | likely_benign | 0.1071 | benign | -0.447 | Destabilizing | 0.026 | N | 0.161 | neutral | N | 0.438788654 | None | None | N |
E/F | 0.8731 | likely_pathogenic | 0.8547 | pathogenic | -0.274 | Destabilizing | 0.988 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/G | 0.2734 | likely_benign | 0.2523 | benign | -0.83 | Destabilizing | 0.811 | D | 0.601 | neutral | N | 0.517673512 | None | None | N |
E/H | 0.6113 | likely_pathogenic | 0.5786 | pathogenic | -0.082 | Destabilizing | 0.988 | D | 0.534 | neutral | None | None | None | None | N |
E/I | 0.6151 | likely_pathogenic | 0.5762 | pathogenic | 0.011 | Stabilizing | 0.976 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/K | 0.3322 | likely_benign | 0.2779 | benign | 0.205 | Stabilizing | 0.896 | D | 0.53 | neutral | N | 0.468218914 | None | None | N |
E/L | 0.6413 | likely_pathogenic | 0.5922 | pathogenic | 0.011 | Stabilizing | 0.976 | D | 0.617 | neutral | None | None | None | None | N |
E/M | 0.6342 | likely_pathogenic | 0.5902 | pathogenic | 0.163 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/N | 0.2713 | likely_benign | 0.2587 | benign | -0.282 | Destabilizing | 0.076 | N | 0.22 | neutral | None | None | None | None | N |
E/P | 0.9586 | likely_pathogenic | 0.9509 | pathogenic | -0.17 | Destabilizing | 0.988 | D | 0.607 | neutral | None | None | None | None | N |
E/Q | 0.2411 | likely_benign | 0.2174 | benign | -0.222 | Destabilizing | 0.984 | D | 0.553 | neutral | D | 0.523484764 | None | None | N |
E/R | 0.4932 | ambiguous | 0.4395 | ambiguous | 0.467 | Stabilizing | 0.976 | D | 0.517 | neutral | None | None | None | None | N |
E/S | 0.2591 | likely_benign | 0.2428 | benign | -0.447 | Destabilizing | 0.851 | D | 0.517 | neutral | None | None | None | None | N |
E/T | 0.3335 | likely_benign | 0.3 | benign | -0.247 | Destabilizing | 0.919 | D | 0.567 | neutral | None | None | None | None | N |
E/V | 0.4025 | ambiguous | 0.3583 | ambiguous | -0.17 | Destabilizing | 0.938 | D | 0.599 | neutral | N | 0.489121099 | None | None | N |
E/W | 0.9494 | likely_pathogenic | 0.9409 | pathogenic | -0.032 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/Y | 0.742 | likely_pathogenic | 0.7221 | pathogenic | -0.011 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.