Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19611 | 59056;59057;59058 | chr2:178593377;178593376;178593375 | chr2:179458104;179458103;179458102 |
N2AB | 17970 | 54133;54134;54135 | chr2:178593377;178593376;178593375 | chr2:179458104;179458103;179458102 |
N2A | 17043 | 51352;51353;51354 | chr2:178593377;178593376;178593375 | chr2:179458104;179458103;179458102 |
N2B | 10546 | 31861;31862;31863 | chr2:178593377;178593376;178593375 | chr2:179458104;179458103;179458102 |
Novex-1 | 10671 | 32236;32237;32238 | chr2:178593377;178593376;178593375 | chr2:179458104;179458103;179458102 |
Novex-2 | 10738 | 32437;32438;32439 | chr2:178593377;178593376;178593375 | chr2:179458104;179458103;179458102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.018 | N | 0.275 | 0.296 | 0.273503213844 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1298 | likely_benign | 0.1178 | benign | -0.664 | Destabilizing | 0.565 | D | 0.522 | neutral | N | 0.502478867 | None | None | I |
T/C | 0.4365 | ambiguous | 0.4284 | ambiguous | -0.352 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | I |
T/D | 0.5318 | ambiguous | 0.5146 | ambiguous | -0.698 | Destabilizing | 0.923 | D | 0.599 | neutral | None | None | None | None | I |
T/E | 0.3447 | ambiguous | 0.3331 | benign | -0.689 | Destabilizing | 0.633 | D | 0.569 | neutral | None | None | None | None | I |
T/F | 0.2829 | likely_benign | 0.2787 | benign | -0.603 | Destabilizing | 0.024 | N | 0.364 | neutral | None | None | None | None | I |
T/G | 0.3073 | likely_benign | 0.2983 | benign | -0.947 | Destabilizing | 0.775 | D | 0.591 | neutral | None | None | None | None | I |
T/H | 0.281 | likely_benign | 0.2767 | benign | -1.279 | Destabilizing | 0.989 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/I | 0.1686 | likely_benign | 0.159 | benign | 0.007 | Stabilizing | 0.82 | D | 0.591 | neutral | N | 0.49731967 | None | None | I |
T/K | 0.1753 | likely_benign | 0.1695 | benign | -0.943 | Destabilizing | 0.018 | N | 0.275 | neutral | N | 0.472511328 | None | None | I |
T/L | 0.1021 | likely_benign | 0.1044 | benign | 0.007 | Stabilizing | 0.633 | D | 0.529 | neutral | None | None | None | None | I |
T/M | 0.1071 | likely_benign | 0.1012 | benign | 0.324 | Stabilizing | 0.989 | D | 0.653 | neutral | None | None | None | None | I |
T/N | 0.1583 | likely_benign | 0.153 | benign | -0.874 | Destabilizing | 0.923 | D | 0.549 | neutral | None | None | None | None | I |
T/P | 0.6655 | likely_pathogenic | 0.6299 | pathogenic | -0.184 | Destabilizing | 0.949 | D | 0.669 | neutral | D | 0.528940915 | None | None | I |
T/Q | 0.2128 | likely_benign | 0.2068 | benign | -1.006 | Destabilizing | 0.858 | D | 0.665 | neutral | None | None | None | None | I |
T/R | 0.152 | likely_benign | 0.1426 | benign | -0.703 | Destabilizing | 0.82 | D | 0.592 | neutral | N | 0.482817676 | None | None | I |
T/S | 0.1402 | likely_benign | 0.1363 | benign | -1.036 | Destabilizing | 0.565 | D | 0.517 | neutral | N | 0.47282727 | None | None | I |
T/V | 0.1511 | likely_benign | 0.1459 | benign | -0.184 | Destabilizing | 0.775 | D | 0.483 | neutral | None | None | None | None | I |
T/W | 0.6123 | likely_pathogenic | 0.6082 | pathogenic | -0.618 | Destabilizing | 0.996 | D | 0.764 | deleterious | None | None | None | None | I |
T/Y | 0.34 | ambiguous | 0.3381 | benign | -0.398 | Destabilizing | 0.858 | D | 0.727 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.