Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19638 | 59137;59138;59139 | chr2:178593296;178593295;178593294 | chr2:179458023;179458022;179458021 |
N2AB | 17997 | 54214;54215;54216 | chr2:178593296;178593295;178593294 | chr2:179458023;179458022;179458021 |
N2A | 17070 | 51433;51434;51435 | chr2:178593296;178593295;178593294 | chr2:179458023;179458022;179458021 |
N2B | 10573 | 31942;31943;31944 | chr2:178593296;178593295;178593294 | chr2:179458023;179458022;179458021 |
Novex-1 | 10698 | 32317;32318;32319 | chr2:178593296;178593295;178593294 | chr2:179458023;179458022;179458021 |
Novex-2 | 10765 | 32518;32519;32520 | chr2:178593296;178593295;178593294 | chr2:179458023;179458022;179458021 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs1257692385 | 0.765 | 0.966 | N | 0.636 | 0.476 | 0.675970969783 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/I | rs1257692385 | 0.765 | 0.966 | N | 0.636 | 0.476 | 0.675970969783 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3411 | ambiguous | 0.3983 | ambiguous | -0.763 | Destabilizing | 0.688 | D | 0.505 | neutral | None | None | None | None | N |
K/C | 0.629 | likely_pathogenic | 0.6951 | pathogenic | -0.705 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
K/D | 0.6194 | likely_pathogenic | 0.6757 | pathogenic | 0.067 | Stabilizing | 0.728 | D | 0.519 | neutral | None | None | None | None | N |
K/E | 0.2106 | likely_benign | 0.2449 | benign | 0.241 | Stabilizing | 0.022 | N | 0.298 | neutral | N | 0.405886802 | None | None | N |
K/F | 0.8308 | likely_pathogenic | 0.865 | pathogenic | -0.317 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
K/G | 0.5472 | ambiguous | 0.5979 | pathogenic | -1.146 | Destabilizing | 0.842 | D | 0.558 | neutral | None | None | None | None | N |
K/H | 0.2884 | likely_benign | 0.3287 | benign | -1.089 | Destabilizing | 0.974 | D | 0.595 | neutral | None | None | None | None | N |
K/I | 0.3979 | ambiguous | 0.4506 | ambiguous | 0.257 | Stabilizing | 0.966 | D | 0.636 | neutral | N | 0.494892653 | None | None | N |
K/L | 0.4606 | ambiguous | 0.5052 | ambiguous | 0.257 | Stabilizing | 0.842 | D | 0.563 | neutral | None | None | None | None | N |
K/M | 0.2759 | likely_benign | 0.3093 | benign | -0.1 | Destabilizing | 0.974 | D | 0.593 | neutral | None | None | None | None | N |
K/N | 0.4504 | ambiguous | 0.519 | ambiguous | -0.536 | Destabilizing | 0.801 | D | 0.467 | neutral | N | 0.477325613 | None | None | N |
K/P | 0.9433 | likely_pathogenic | 0.9421 | pathogenic | -0.055 | Destabilizing | 0.974 | D | 0.595 | neutral | None | None | None | None | N |
K/Q | 0.1174 | likely_benign | 0.1387 | benign | -0.442 | Destabilizing | 0.051 | N | 0.298 | neutral | N | 0.423376484 | None | None | N |
K/R | 0.0773 | likely_benign | 0.0779 | benign | -0.258 | Destabilizing | 0.669 | D | 0.517 | neutral | N | 0.421432257 | None | None | N |
K/S | 0.3601 | ambiguous | 0.4254 | ambiguous | -1.242 | Destabilizing | 0.842 | D | 0.503 | neutral | None | None | None | None | N |
K/T | 0.1451 | likely_benign | 0.1693 | benign | -0.839 | Destabilizing | 0.801 | D | 0.515 | neutral | N | 0.426760719 | None | None | N |
K/V | 0.3072 | likely_benign | 0.3397 | benign | -0.055 | Destabilizing | 0.915 | D | 0.592 | neutral | None | None | None | None | N |
K/W | 0.8438 | likely_pathogenic | 0.8661 | pathogenic | -0.208 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/Y | 0.6241 | likely_pathogenic | 0.6785 | pathogenic | 0.075 | Stabilizing | 0.991 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.