Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19649 | 59170;59171;59172 | chr2:178593263;178593262;178593261 | chr2:179457990;179457989;179457988 |
N2AB | 18008 | 54247;54248;54249 | chr2:178593263;178593262;178593261 | chr2:179457990;179457989;179457988 |
N2A | 17081 | 51466;51467;51468 | chr2:178593263;178593262;178593261 | chr2:179457990;179457989;179457988 |
N2B | 10584 | 31975;31976;31977 | chr2:178593263;178593262;178593261 | chr2:179457990;179457989;179457988 |
Novex-1 | 10709 | 32350;32351;32352 | chr2:178593263;178593262;178593261 | chr2:179457990;179457989;179457988 |
Novex-2 | 10776 | 32551;32552;32553 | chr2:178593263;178593262;178593261 | chr2:179457990;179457989;179457988 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs886038922 | None | None | D | 0.205 | 0.119 | 0.124217242631 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/H | rs886038922 | None | None | D | 0.205 | 0.119 | 0.124217242631 | gnomAD-4.0.0 | 4.95879E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.7821E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1935 | likely_benign | 0.2166 | benign | -0.921 | Destabilizing | 0.035 | N | 0.401 | neutral | None | None | None | None | N |
Q/C | 0.5895 | likely_pathogenic | 0.6188 | pathogenic | -0.115 | Destabilizing | 0.935 | D | 0.624 | neutral | None | None | None | None | N |
Q/D | 0.3995 | ambiguous | 0.4545 | ambiguous | -0.858 | Destabilizing | 0.035 | N | 0.388 | neutral | None | None | None | None | N |
Q/E | 0.0621 | likely_benign | 0.0663 | benign | -0.654 | Destabilizing | None | N | 0.093 | neutral | N | 0.350417521 | None | None | N |
Q/F | 0.6745 | likely_pathogenic | 0.7139 | pathogenic | -0.27 | Destabilizing | 0.38 | N | 0.611 | neutral | None | None | None | None | N |
Q/G | 0.3531 | ambiguous | 0.3814 | ambiguous | -1.36 | Destabilizing | 0.149 | N | 0.502 | neutral | None | None | None | None | N |
Q/H | 0.2379 | likely_benign | 0.2665 | benign | -0.926 | Destabilizing | None | N | 0.205 | neutral | D | 0.522713973 | None | None | N |
Q/I | 0.3941 | ambiguous | 0.3837 | ambiguous | 0.258 | Stabilizing | 0.555 | D | 0.604 | neutral | None | None | None | None | N |
Q/K | 0.1569 | likely_benign | 0.1498 | benign | -0.418 | Destabilizing | 0.027 | N | 0.424 | neutral | N | 0.469090131 | None | None | N |
Q/L | 0.1457 | likely_benign | 0.15 | benign | 0.258 | Stabilizing | 0.117 | N | 0.519 | neutral | N | 0.486099811 | None | None | N |
Q/M | 0.3402 | ambiguous | 0.3447 | ambiguous | 0.629 | Stabilizing | 0.791 | D | 0.487 | neutral | None | None | None | None | N |
Q/N | 0.2696 | likely_benign | 0.3136 | benign | -1.048 | Destabilizing | 0.081 | N | 0.401 | neutral | None | None | None | None | N |
Q/P | 0.2218 | likely_benign | 0.2145 | benign | -0.107 | Destabilizing | 0.211 | N | 0.524 | neutral | N | 0.483406223 | None | None | N |
Q/R | 0.1654 | likely_benign | 0.1585 | benign | -0.486 | Destabilizing | 0.117 | N | 0.423 | neutral | N | 0.473535946 | None | None | N |
Q/S | 0.1979 | likely_benign | 0.2258 | benign | -1.322 | Destabilizing | 0.035 | N | 0.422 | neutral | None | None | None | None | N |
Q/T | 0.2073 | likely_benign | 0.2141 | benign | -0.914 | Destabilizing | 0.149 | N | 0.467 | neutral | None | None | None | None | N |
Q/V | 0.2379 | likely_benign | 0.2373 | benign | -0.107 | Destabilizing | 0.149 | N | 0.568 | neutral | None | None | None | None | N |
Q/W | 0.6764 | likely_pathogenic | 0.66 | pathogenic | -0.174 | Destabilizing | 0.935 | D | 0.598 | neutral | None | None | None | None | N |
Q/Y | 0.4551 | ambiguous | 0.5004 | ambiguous | 0.078 | Stabilizing | 0.235 | N | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.