Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19651 | 59176;59177;59178 | chr2:178593257;178593256;178593255 | chr2:179457984;179457983;179457982 |
N2AB | 18010 | 54253;54254;54255 | chr2:178593257;178593256;178593255 | chr2:179457984;179457983;179457982 |
N2A | 17083 | 51472;51473;51474 | chr2:178593257;178593256;178593255 | chr2:179457984;179457983;179457982 |
N2B | 10586 | 31981;31982;31983 | chr2:178593257;178593256;178593255 | chr2:179457984;179457983;179457982 |
Novex-1 | 10711 | 32356;32357;32358 | chr2:178593257;178593256;178593255 | chr2:179457984;179457983;179457982 |
Novex-2 | 10778 | 32557;32558;32559 | chr2:178593257;178593256;178593255 | chr2:179457984;179457983;179457982 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1442747427 | None | 0.999 | N | 0.608 | 0.423 | 0.432154444652 | gnomAD-4.0.0 | 3.18392E-06 | None | None | None | None | N | None | 5.66059E-05 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.614 | likely_pathogenic | 0.5922 | pathogenic | -2.118 | Highly Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.499085053 | None | None | N |
E/C | 0.9476 | likely_pathogenic | 0.9528 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/D | 0.7249 | likely_pathogenic | 0.7195 | pathogenic | -1.7 | Destabilizing | 0.999 | D | 0.516 | neutral | N | 0.501162194 | None | None | N |
E/F | 0.9633 | likely_pathogenic | 0.9641 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/G | 0.8583 | likely_pathogenic | 0.8441 | pathogenic | -2.5 | Highly Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.518038682 | None | None | N |
E/H | 0.9144 | likely_pathogenic | 0.9145 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/I | 0.6231 | likely_pathogenic | 0.6338 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/K | 0.7652 | likely_pathogenic | 0.7508 | pathogenic | -1.888 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.47214248 | None | None | N |
E/L | 0.827 | likely_pathogenic | 0.8303 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/M | 0.7523 | likely_pathogenic | 0.7503 | pathogenic | -0.175 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/N | 0.8772 | likely_pathogenic | 0.875 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/P | 0.9984 | likely_pathogenic | 0.9986 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/Q | 0.325 | likely_benign | 0.325 | benign | -1.737 | Destabilizing | 1.0 | D | 0.654 | neutral | D | 0.523503406 | None | None | N |
E/R | 0.8391 | likely_pathogenic | 0.8394 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/S | 0.6662 | likely_pathogenic | 0.6535 | pathogenic | -2.77 | Highly Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
E/T | 0.6789 | likely_pathogenic | 0.6784 | pathogenic | -2.398 | Highly Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/V | 0.4843 | ambiguous | 0.482 | ambiguous | -1.364 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | D | 0.523772765 | None | None | N |
E/W | 0.992 | likely_pathogenic | 0.9922 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/Y | 0.9489 | likely_pathogenic | 0.9487 | pathogenic | -1.614 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.