Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19655 | 59188;59189;59190 | chr2:178593245;178593244;178593243 | chr2:179457972;179457971;179457970 |
N2AB | 18014 | 54265;54266;54267 | chr2:178593245;178593244;178593243 | chr2:179457972;179457971;179457970 |
N2A | 17087 | 51484;51485;51486 | chr2:178593245;178593244;178593243 | chr2:179457972;179457971;179457970 |
N2B | 10590 | 31993;31994;31995 | chr2:178593245;178593244;178593243 | chr2:179457972;179457971;179457970 |
Novex-1 | 10715 | 32368;32369;32370 | chr2:178593245;178593244;178593243 | chr2:179457972;179457971;179457970 |
Novex-2 | 10782 | 32569;32570;32571 | chr2:178593245;178593244;178593243 | chr2:179457972;179457971;179457970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.497 | N | 0.783 | 0.289 | 0.183819452728 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0797 | likely_benign | 0.0758 | benign | -1.079 | Destabilizing | None | N | 0.271 | neutral | N | 0.444519761 | None | None | N |
S/C | 0.0759 | likely_benign | 0.0789 | benign | -0.991 | Destabilizing | 0.883 | D | 0.748 | deleterious | N | 0.497047524 | None | None | N |
S/D | 0.861 | likely_pathogenic | 0.8686 | pathogenic | -2.032 | Highly Destabilizing | 0.567 | D | 0.765 | deleterious | None | None | None | None | N |
S/E | 0.7807 | likely_pathogenic | 0.7789 | pathogenic | -1.808 | Destabilizing | 0.272 | N | 0.755 | deleterious | None | None | None | None | N |
S/F | 0.2068 | likely_benign | 0.1832 | benign | -0.722 | Destabilizing | 0.497 | N | 0.785 | deleterious | N | 0.478115046 | None | None | N |
S/G | 0.1794 | likely_benign | 0.1911 | benign | -1.47 | Destabilizing | 0.157 | N | 0.717 | prob.delet. | None | None | None | None | N |
S/H | 0.5168 | ambiguous | 0.4932 | ambiguous | -1.689 | Destabilizing | 0.968 | D | 0.748 | deleterious | None | None | None | None | N |
S/I | 0.2458 | likely_benign | 0.2409 | benign | -0.072 | Destabilizing | 0.157 | N | 0.769 | deleterious | None | None | None | None | N |
S/K | 0.8115 | likely_pathogenic | 0.8006 | pathogenic | -0.564 | Destabilizing | 0.272 | N | 0.739 | prob.delet. | None | None | None | None | N |
S/L | 0.0915 | likely_benign | 0.0882 | benign | -0.072 | Destabilizing | 0.072 | N | 0.761 | deleterious | None | None | None | None | N |
S/M | 0.1221 | likely_benign | 0.1316 | benign | -0.341 | Destabilizing | 0.033 | N | 0.589 | neutral | None | None | None | None | N |
S/N | 0.4078 | ambiguous | 0.4484 | ambiguous | -1.351 | Destabilizing | 0.726 | D | 0.793 | deleterious | None | None | None | None | N |
S/P | 0.9887 | likely_pathogenic | 0.9853 | pathogenic | -0.375 | Destabilizing | 0.497 | N | 0.783 | deleterious | N | 0.494499469 | None | None | N |
S/Q | 0.5942 | likely_pathogenic | 0.6038 | pathogenic | -1.026 | Destabilizing | 0.726 | D | 0.777 | deleterious | None | None | None | None | N |
S/R | 0.7329 | likely_pathogenic | 0.7201 | pathogenic | -0.953 | Destabilizing | 0.567 | D | 0.781 | deleterious | None | None | None | None | N |
S/T | 0.1005 | likely_benign | 0.1017 | benign | -0.946 | Destabilizing | 0.124 | N | 0.739 | prob.delet. | N | 0.466223185 | None | None | N |
S/V | 0.2221 | likely_benign | 0.2172 | benign | -0.375 | Destabilizing | 0.157 | N | 0.759 | deleterious | None | None | None | None | N |
S/W | 0.4079 | ambiguous | 0.3542 | ambiguous | -1.064 | Destabilizing | 0.968 | D | 0.775 | deleterious | None | None | None | None | N |
S/Y | 0.202 | likely_benign | 0.1772 | benign | -0.62 | Destabilizing | 0.667 | D | 0.781 | deleterious | N | 0.480211202 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.