Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19659 | 59200;59201;59202 | chr2:178593233;178593232;178593231 | chr2:179457960;179457959;179457958 |
N2AB | 18018 | 54277;54278;54279 | chr2:178593233;178593232;178593231 | chr2:179457960;179457959;179457958 |
N2A | 17091 | 51496;51497;51498 | chr2:178593233;178593232;178593231 | chr2:179457960;179457959;179457958 |
N2B | 10594 | 32005;32006;32007 | chr2:178593233;178593232;178593231 | chr2:179457960;179457959;179457958 |
Novex-1 | 10719 | 32380;32381;32382 | chr2:178593233;178593232;178593231 | chr2:179457960;179457959;179457958 |
Novex-2 | 10786 | 32581;32582;32583 | chr2:178593233;178593232;178593231 | chr2:179457960;179457959;179457958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.722 | N | 0.417 | 0.099 | 0.368554958709 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs2050629562 | None | 0.565 | N | 0.443 | 0.257 | 0.260249123532 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs2050629562 | None | 0.565 | N | 0.443 | 0.257 | 0.260249123532 | gnomAD-4.0.0 | 7.10514E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.43487E-06 | 0 | 0 |
E/Q | None | None | 0.075 | N | 0.235 | 0.111 | 0.301789629655 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1768 | likely_benign | 0.1767 | benign | -0.464 | Destabilizing | 0.565 | D | 0.494 | neutral | N | 0.439095298 | None | None | I |
E/C | 0.8798 | likely_pathogenic | 0.8776 | pathogenic | -0.101 | Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | I |
E/D | 0.1771 | likely_benign | 0.17 | benign | -0.486 | Destabilizing | 0.722 | D | 0.417 | neutral | N | 0.486926531 | None | None | I |
E/F | 0.8664 | likely_pathogenic | 0.865 | pathogenic | -0.271 | Destabilizing | 0.961 | D | 0.602 | neutral | None | None | None | None | I |
E/G | 0.2768 | likely_benign | 0.2667 | benign | -0.692 | Destabilizing | 0.722 | D | 0.558 | neutral | N | 0.505757434 | None | None | I |
E/H | 0.6339 | likely_pathogenic | 0.619 | pathogenic | -0.134 | Destabilizing | 0.989 | D | 0.369 | neutral | None | None | None | None | I |
E/I | 0.3585 | ambiguous | 0.3458 | ambiguous | 0.114 | Stabilizing | 0.096 | N | 0.475 | neutral | None | None | None | None | I |
E/K | 0.2664 | likely_benign | 0.2491 | benign | 0.187 | Stabilizing | 0.565 | D | 0.443 | neutral | N | 0.457662416 | None | None | I |
E/L | 0.5504 | ambiguous | 0.5293 | ambiguous | 0.114 | Stabilizing | 0.633 | D | 0.564 | neutral | None | None | None | None | I |
E/M | 0.5459 | ambiguous | 0.5236 | ambiguous | 0.254 | Stabilizing | 0.961 | D | 0.59 | neutral | None | None | None | None | I |
E/N | 0.414 | ambiguous | 0.4005 | ambiguous | -0.19 | Destabilizing | 0.923 | D | 0.393 | neutral | None | None | None | None | I |
E/P | 0.7396 | likely_pathogenic | 0.7513 | pathogenic | -0.057 | Destabilizing | 0.961 | D | 0.506 | neutral | None | None | None | None | I |
E/Q | 0.2164 | likely_benign | 0.2106 | benign | -0.131 | Destabilizing | 0.075 | N | 0.235 | neutral | N | 0.504877573 | None | None | I |
E/R | 0.4156 | ambiguous | 0.4087 | ambiguous | 0.405 | Stabilizing | 0.858 | D | 0.389 | neutral | None | None | None | None | I |
E/S | 0.2753 | likely_benign | 0.2751 | benign | -0.349 | Destabilizing | 0.633 | D | 0.433 | neutral | None | None | None | None | I |
E/T | 0.3123 | likely_benign | 0.3036 | benign | -0.161 | Destabilizing | 0.775 | D | 0.539 | neutral | None | None | None | None | I |
E/V | 0.2489 | likely_benign | 0.2361 | benign | -0.057 | Destabilizing | 0.034 | N | 0.411 | neutral | N | 0.482867505 | None | None | I |
E/W | 0.9519 | likely_pathogenic | 0.9536 | pathogenic | -0.096 | Destabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/Y | 0.7682 | likely_pathogenic | 0.7734 | pathogenic | -0.025 | Destabilizing | 0.961 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.