Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19691 | 59296;59297;59298 | chr2:178593048;178593047;178593046 | chr2:179457775;179457774;179457773 |
N2AB | 18050 | 54373;54374;54375 | chr2:178593048;178593047;178593046 | chr2:179457775;179457774;179457773 |
N2A | 17123 | 51592;51593;51594 | chr2:178593048;178593047;178593046 | chr2:179457775;179457774;179457773 |
N2B | 10626 | 32101;32102;32103 | chr2:178593048;178593047;178593046 | chr2:179457775;179457774;179457773 |
Novex-1 | 10751 | 32476;32477;32478 | chr2:178593048;178593047;178593046 | chr2:179457775;179457774;179457773 |
Novex-2 | 10818 | 32677;32678;32679 | chr2:178593048;178593047;178593046 | chr2:179457775;179457774;179457773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.963 | N | 0.431 | 0.275 | 0.307016933798 | gnomAD-4.0.0 | 1.36873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79918E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6899 | likely_pathogenic | 0.5745 | pathogenic | -0.34 | Destabilizing | 0.865 | D | 0.623 | neutral | N | 0.472178479 | None | None | N |
D/C | 0.9521 | likely_pathogenic | 0.9239 | pathogenic | 0.135 | Stabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/E | 0.6317 | likely_pathogenic | 0.5258 | ambiguous | -0.437 | Destabilizing | 0.963 | D | 0.431 | neutral | N | 0.501682552 | None | None | N |
D/F | 0.9346 | likely_pathogenic | 0.8956 | pathogenic | -0.42 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/G | 0.6543 | likely_pathogenic | 0.5512 | ambiguous | -0.552 | Destabilizing | 0.039 | N | 0.342 | neutral | N | 0.482244564 | None | None | N |
D/H | 0.8191 | likely_pathogenic | 0.7325 | pathogenic | -0.544 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.505668418 | None | None | N |
D/I | 0.9207 | likely_pathogenic | 0.8482 | pathogenic | 0.173 | Stabilizing | 0.992 | D | 0.759 | deleterious | None | None | None | None | N |
D/K | 0.9173 | likely_pathogenic | 0.8684 | pathogenic | 0.209 | Stabilizing | 0.983 | D | 0.776 | deleterious | None | None | None | None | N |
D/L | 0.8849 | likely_pathogenic | 0.8201 | pathogenic | 0.173 | Stabilizing | 0.992 | D | 0.753 | deleterious | None | None | None | None | N |
D/M | 0.9637 | likely_pathogenic | 0.9334 | pathogenic | 0.487 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/N | 0.3182 | likely_benign | 0.2372 | benign | -0.008 | Destabilizing | 0.978 | D | 0.688 | prob.neutral | N | 0.464758966 | None | None | N |
D/P | 0.993 | likely_pathogenic | 0.9864 | pathogenic | 0.025 | Stabilizing | 0.997 | D | 0.773 | deleterious | None | None | None | None | N |
D/Q | 0.8728 | likely_pathogenic | 0.814 | pathogenic | 0.011 | Stabilizing | 0.997 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/R | 0.8981 | likely_pathogenic | 0.8517 | pathogenic | 0.237 | Stabilizing | 0.992 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/S | 0.4649 | ambiguous | 0.3593 | ambiguous | -0.131 | Destabilizing | 0.944 | D | 0.61 | neutral | None | None | None | None | N |
D/T | 0.7891 | likely_pathogenic | 0.6836 | pathogenic | 0.03 | Stabilizing | 0.992 | D | 0.774 | deleterious | None | None | None | None | N |
D/V | 0.8111 | likely_pathogenic | 0.6943 | pathogenic | 0.025 | Stabilizing | 0.989 | D | 0.761 | deleterious | N | 0.495842595 | None | None | N |
D/W | 0.9872 | likely_pathogenic | 0.9806 | pathogenic | -0.329 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/Y | 0.7204 | likely_pathogenic | 0.6139 | pathogenic | -0.195 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.500895478 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.