Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19717 | 59374;59375;59376 | chr2:178592970;178592969;178592968 | chr2:179457697;179457696;179457695 |
N2AB | 18076 | 54451;54452;54453 | chr2:178592970;178592969;178592968 | chr2:179457697;179457696;179457695 |
N2A | 17149 | 51670;51671;51672 | chr2:178592970;178592969;178592968 | chr2:179457697;179457696;179457695 |
N2B | 10652 | 32179;32180;32181 | chr2:178592970;178592969;178592968 | chr2:179457697;179457696;179457695 |
Novex-1 | 10777 | 32554;32555;32556 | chr2:178592970;178592969;178592968 | chr2:179457697;179457696;179457695 |
Novex-2 | 10844 | 32755;32756;32757 | chr2:178592970;178592969;178592968 | chr2:179457697;179457696;179457695 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.625 | D | 0.597 | 0.508 | 0.734413240494 | gnomAD-4.0.0 | 2.73722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59831E-06 | 0 | 0 |
V/I | rs1308382519 | -0.661 | 0.012 | N | 0.243 | 0.146 | 0.387689773709 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs1308382519 | -0.661 | 0.012 | N | 0.243 | 0.146 | 0.387689773709 | gnomAD-4.0.0 | 3.18353E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86599E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.881 | likely_pathogenic | 0.8562 | pathogenic | -2.453 | Highly Destabilizing | 0.625 | D | 0.597 | neutral | D | 0.537362656 | None | None | N |
V/C | 0.976 | likely_pathogenic | 0.976 | pathogenic | -1.704 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -3.472 | Highly Destabilizing | 0.989 | D | 0.867 | deleterious | D | 0.54947943 | None | None | N |
V/E | 0.9963 | likely_pathogenic | 0.9942 | pathogenic | -3.149 | Highly Destabilizing | 0.991 | D | 0.83 | deleterious | None | None | None | None | N |
V/F | 0.9174 | likely_pathogenic | 0.9025 | pathogenic | -1.454 | Destabilizing | 0.934 | D | 0.738 | prob.delet. | D | 0.549225941 | None | None | N |
V/G | 0.9752 | likely_pathogenic | 0.9678 | pathogenic | -3.047 | Highly Destabilizing | 0.989 | D | 0.825 | deleterious | D | 0.54947943 | None | None | N |
V/H | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -2.956 | Highly Destabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | N |
V/I | 0.0779 | likely_benign | 0.0826 | benign | -0.708 | Destabilizing | 0.012 | N | 0.243 | neutral | N | 0.445104125 | None | None | N |
V/K | 0.9966 | likely_pathogenic | 0.9948 | pathogenic | -2.091 | Highly Destabilizing | 0.974 | D | 0.805 | deleterious | None | None | None | None | N |
V/L | 0.513 | ambiguous | 0.5143 | ambiguous | -0.708 | Destabilizing | 0.002 | N | 0.321 | neutral | N | 0.483742658 | None | None | N |
V/M | 0.7557 | likely_pathogenic | 0.7099 | pathogenic | -0.868 | Destabilizing | 0.949 | D | 0.606 | neutral | None | None | None | None | N |
V/N | 0.9966 | likely_pathogenic | 0.9955 | pathogenic | -2.817 | Highly Destabilizing | 0.991 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9892 | likely_pathogenic | 0.9872 | pathogenic | -1.274 | Destabilizing | 0.991 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9958 | likely_pathogenic | 0.9934 | pathogenic | -2.444 | Highly Destabilizing | 0.991 | D | 0.863 | deleterious | None | None | None | None | N |
V/R | 0.993 | likely_pathogenic | 0.9894 | pathogenic | -2.187 | Highly Destabilizing | 0.991 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.9834 | likely_pathogenic | 0.9772 | pathogenic | -3.269 | Highly Destabilizing | 0.974 | D | 0.795 | deleterious | None | None | None | None | N |
V/T | 0.9002 | likely_pathogenic | 0.88 | pathogenic | -2.792 | Highly Destabilizing | 0.842 | D | 0.589 | neutral | None | None | None | None | N |
V/W | 0.9985 | likely_pathogenic | 0.998 | pathogenic | -2.02 | Highly Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
V/Y | 0.9955 | likely_pathogenic | 0.994 | pathogenic | -1.718 | Destabilizing | 0.991 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.