Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19724 | 59395;59396;59397 | chr2:178592949;178592948;178592947 | chr2:179457676;179457675;179457674 |
N2AB | 18083 | 54472;54473;54474 | chr2:178592949;178592948;178592947 | chr2:179457676;179457675;179457674 |
N2A | 17156 | 51691;51692;51693 | chr2:178592949;178592948;178592947 | chr2:179457676;179457675;179457674 |
N2B | 10659 | 32200;32201;32202 | chr2:178592949;178592948;178592947 | chr2:179457676;179457675;179457674 |
Novex-1 | 10784 | 32575;32576;32577 | chr2:178592949;178592948;178592947 | chr2:179457676;179457675;179457674 |
Novex-2 | 10851 | 32776;32777;32778 | chr2:178592949;178592948;178592947 | chr2:179457676;179457675;179457674 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1373178934 | None | 0.005 | N | 0.151 | 0.139 | 0.279776271856 | gnomAD-4.0.0 | 1.3686E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79916E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1418 | likely_benign | 0.1379 | benign | -0.205 | Destabilizing | 0.801 | D | 0.317 | neutral | N | 0.430494458 | None | None | N |
D/C | 0.4582 | ambiguous | 0.4522 | ambiguous | 0.096 | Stabilizing | 0.998 | D | 0.467 | neutral | None | None | None | None | N |
D/E | 0.1028 | likely_benign | 0.1044 | benign | -0.34 | Destabilizing | 0.005 | N | 0.151 | neutral | N | 0.416274367 | None | None | N |
D/F | 0.4739 | ambiguous | 0.491 | ambiguous | -0.301 | Destabilizing | 0.904 | D | 0.44 | neutral | None | None | None | None | N |
D/G | 0.1649 | likely_benign | 0.1565 | benign | -0.385 | Destabilizing | 0.012 | N | 0.235 | neutral | N | 0.430281027 | None | None | N |
D/H | 0.2587 | likely_benign | 0.2409 | benign | -0.225 | Destabilizing | 0.966 | D | 0.305 | neutral | N | 0.509493959 | None | None | N |
D/I | 0.2876 | likely_benign | 0.3037 | benign | 0.215 | Stabilizing | 0.974 | D | 0.447 | neutral | None | None | None | None | N |
D/K | 0.2859 | likely_benign | 0.2849 | benign | 0.259 | Stabilizing | 0.728 | D | 0.276 | neutral | None | None | None | None | N |
D/L | 0.2734 | likely_benign | 0.2835 | benign | 0.215 | Stabilizing | 0.949 | D | 0.435 | neutral | None | None | None | None | N |
D/M | 0.4077 | ambiguous | 0.4247 | ambiguous | 0.357 | Stabilizing | 0.998 | D | 0.426 | neutral | None | None | None | None | N |
D/N | 0.1038 | likely_benign | 0.0983 | benign | 0.107 | Stabilizing | 0.801 | D | 0.346 | neutral | N | 0.460430576 | None | None | N |
D/P | 0.7482 | likely_pathogenic | 0.7654 | pathogenic | 0.097 | Stabilizing | 0.974 | D | 0.325 | neutral | None | None | None | None | N |
D/Q | 0.2337 | likely_benign | 0.2292 | benign | 0.112 | Stabilizing | 0.904 | D | 0.29 | neutral | None | None | None | None | N |
D/R | 0.3326 | likely_benign | 0.3286 | benign | 0.361 | Stabilizing | 0.949 | D | 0.406 | neutral | None | None | None | None | N |
D/S | 0.1117 | likely_benign | 0.1055 | benign | -0.014 | Destabilizing | 0.842 | D | 0.261 | neutral | None | None | None | None | N |
D/T | 0.172 | likely_benign | 0.1665 | benign | 0.116 | Stabilizing | 0.842 | D | 0.31 | neutral | None | None | None | None | N |
D/V | 0.1656 | likely_benign | 0.1722 | benign | 0.097 | Stabilizing | 0.966 | D | 0.436 | neutral | N | 0.48523302 | None | None | N |
D/W | 0.7632 | likely_pathogenic | 0.7781 | pathogenic | -0.235 | Destabilizing | 0.998 | D | 0.462 | neutral | None | None | None | None | N |
D/Y | 0.2104 | likely_benign | 0.2092 | benign | -0.085 | Destabilizing | 0.111 | N | 0.349 | neutral | N | 0.473886772 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.