Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19726 | 59401;59402;59403 | chr2:178592943;178592942;178592941 | chr2:179457670;179457669;179457668 |
N2AB | 18085 | 54478;54479;54480 | chr2:178592943;178592942;178592941 | chr2:179457670;179457669;179457668 |
N2A | 17158 | 51697;51698;51699 | chr2:178592943;178592942;178592941 | chr2:179457670;179457669;179457668 |
N2B | 10661 | 32206;32207;32208 | chr2:178592943;178592942;178592941 | chr2:179457670;179457669;179457668 |
Novex-1 | 10786 | 32581;32582;32583 | chr2:178592943;178592942;178592941 | chr2:179457670;179457669;179457668 |
Novex-2 | 10853 | 32782;32783;32784 | chr2:178592943;178592942;178592941 | chr2:179457670;179457669;179457668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1356102019 | None | 0.834 | N | 0.611 | 0.259 | 0.27479166964 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs1356102019 | None | 0.834 | N | 0.611 | 0.259 | 0.27479166964 | gnomAD-4.0.0 | 3.09903E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.2387E-06 | 0 | 0 |
E/Q | None | None | 0.946 | N | 0.599 | 0.298 | 0.318252033908 | gnomAD-4.0.0 | 6.84291E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99582E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1233 | likely_benign | 0.1223 | benign | -0.302 | Destabilizing | 0.834 | D | 0.632 | neutral | N | 0.516134717 | None | None | N |
E/C | 0.6943 | likely_pathogenic | 0.7178 | pathogenic | -0.235 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
E/D | 0.0918 | likely_benign | 0.0872 | benign | -0.21 | Destabilizing | 0.016 | N | 0.388 | neutral | N | 0.451795237 | None | None | N |
E/F | 0.5524 | ambiguous | 0.5803 | pathogenic | -0.197 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | N |
E/G | 0.1372 | likely_benign | 0.1367 | benign | -0.479 | Destabilizing | 0.946 | D | 0.599 | neutral | N | 0.499375753 | None | None | N |
E/H | 0.3678 | ambiguous | 0.379 | ambiguous | 0.186 | Stabilizing | 0.994 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/I | 0.2002 | likely_benign | 0.2016 | benign | 0.126 | Stabilizing | 0.979 | D | 0.752 | deleterious | None | None | None | None | N |
E/K | 0.1511 | likely_benign | 0.1489 | benign | 0.12 | Stabilizing | 0.834 | D | 0.611 | neutral | N | 0.434710986 | None | None | N |
E/L | 0.2688 | likely_benign | 0.2727 | benign | 0.126 | Stabilizing | 0.979 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/M | 0.3184 | likely_benign | 0.3225 | benign | 0.031 | Stabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/N | 0.1612 | likely_benign | 0.1597 | benign | -0.033 | Destabilizing | 0.921 | D | 0.663 | neutral | None | None | None | None | N |
E/P | 0.4864 | ambiguous | 0.5367 | ambiguous | 0.003 | Stabilizing | 0.979 | D | 0.663 | neutral | None | None | None | None | N |
E/Q | 0.139 | likely_benign | 0.1448 | benign | -0.007 | Destabilizing | 0.946 | D | 0.599 | neutral | N | 0.498722392 | None | None | N |
E/R | 0.2699 | likely_benign | 0.2744 | benign | 0.419 | Stabilizing | 0.959 | D | 0.673 | neutral | None | None | None | None | N |
E/S | 0.1631 | likely_benign | 0.1621 | benign | -0.253 | Destabilizing | 0.769 | D | 0.618 | neutral | None | None | None | None | N |
E/T | 0.1481 | likely_benign | 0.1489 | benign | -0.113 | Destabilizing | 0.959 | D | 0.655 | neutral | None | None | None | None | N |
E/V | 0.1315 | likely_benign | 0.1275 | benign | 0.003 | Stabilizing | 0.973 | D | 0.695 | prob.neutral | N | 0.508920743 | None | None | N |
E/W | 0.7973 | likely_pathogenic | 0.8197 | pathogenic | -0.078 | Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
E/Y | 0.4533 | ambiguous | 0.4665 | ambiguous | 0.029 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.