Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19741 | 59446;59447;59448 | chr2:178592898;178592897;178592896 | chr2:179457625;179457624;179457623 |
N2AB | 18100 | 54523;54524;54525 | chr2:178592898;178592897;178592896 | chr2:179457625;179457624;179457623 |
N2A | 17173 | 51742;51743;51744 | chr2:178592898;178592897;178592896 | chr2:179457625;179457624;179457623 |
N2B | 10676 | 32251;32252;32253 | chr2:178592898;178592897;178592896 | chr2:179457625;179457624;179457623 |
Novex-1 | 10801 | 32626;32627;32628 | chr2:178592898;178592897;178592896 | chr2:179457625;179457624;179457623 |
Novex-2 | 10868 | 32827;32828;32829 | chr2:178592898;178592897;178592896 | chr2:179457625;179457624;179457623 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1283284446 | None | 0.012 | N | 0.446 | 0.147 | 0.178374595973 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1283284446 | None | 0.012 | N | 0.446 | 0.147 | 0.178374595973 | gnomAD-4.0.0 | 6.5773E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47106E-05 | 0 | 0 |
K/T | rs1443597990 | None | None | N | 0.321 | 0.203 | 0.156986980423 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94326E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1443597990 | None | None | N | 0.321 | 0.203 | 0.156986980423 | gnomAD-4.0.0 | 2.03017E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13947E-04 | None | 0 | 0 | 0 | 0 | 3.40275E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3135 | likely_benign | 0.1729 | benign | -0.392 | Destabilizing | 0.016 | N | 0.443 | neutral | None | None | None | None | N |
K/C | 0.5379 | ambiguous | 0.4269 | ambiguous | -0.423 | Destabilizing | 0.864 | D | 0.593 | neutral | None | None | None | None | N |
K/D | 0.6336 | likely_pathogenic | 0.4308 | ambiguous | -0.058 | Destabilizing | 0.038 | N | 0.445 | neutral | None | None | None | None | N |
K/E | 0.2137 | likely_benign | 0.1609 | benign | 0.043 | Stabilizing | 0.012 | N | 0.446 | neutral | N | 0.396189883 | None | None | N |
K/F | 0.7061 | likely_pathogenic | 0.5352 | ambiguous | -0.124 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | N |
K/G | 0.4622 | ambiguous | 0.3223 | benign | -0.718 | Destabilizing | 0.016 | N | 0.487 | neutral | None | None | None | None | N |
K/H | 0.2201 | likely_benign | 0.161 | benign | -0.89 | Destabilizing | 0.001 | N | 0.377 | neutral | None | None | None | None | N |
K/I | 0.3183 | likely_benign | 0.2021 | benign | 0.436 | Stabilizing | 0.171 | N | 0.622 | neutral | N | 0.491390988 | None | None | N |
K/L | 0.3957 | ambiguous | 0.248 | benign | 0.436 | Stabilizing | 0.038 | N | 0.51 | neutral | None | None | None | None | N |
K/M | 0.2404 | likely_benign | 0.1478 | benign | 0.06 | Stabilizing | 0.356 | N | 0.581 | neutral | None | None | None | None | N |
K/N | 0.363 | ambiguous | 0.1868 | benign | -0.268 | Destabilizing | None | N | 0.224 | neutral | N | 0.462241517 | None | None | N |
K/P | 0.9577 | likely_pathogenic | 0.845 | pathogenic | 0.19 | Stabilizing | 0.136 | N | 0.593 | neutral | None | None | None | None | N |
K/Q | 0.1194 | likely_benign | 0.1004 | benign | -0.28 | Destabilizing | 0.002 | N | 0.379 | neutral | N | 0.446002628 | None | None | N |
K/R | 0.0715 | likely_benign | 0.0711 | benign | -0.374 | Destabilizing | 0.055 | N | 0.392 | neutral | N | 0.449714937 | None | None | N |
K/S | 0.3181 | likely_benign | 0.1762 | benign | -0.804 | Destabilizing | 0.016 | N | 0.423 | neutral | None | None | None | None | N |
K/T | 0.1239 | likely_benign | 0.0692 | benign | -0.511 | Destabilizing | None | N | 0.321 | neutral | N | 0.4124847 | None | None | N |
K/V | 0.2706 | likely_benign | 0.1877 | benign | 0.19 | Stabilizing | 0.038 | N | 0.528 | neutral | None | None | None | None | N |
K/W | 0.7206 | likely_pathogenic | 0.6197 | pathogenic | -0.086 | Destabilizing | 0.864 | D | 0.607 | neutral | None | None | None | None | N |
K/Y | 0.5656 | likely_pathogenic | 0.4063 | ambiguous | 0.193 | Stabilizing | 0.214 | N | 0.616 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.