Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19753 | 59482;59483;59484 | chr2:178592862;178592861;178592860 | chr2:179457589;179457588;179457587 |
N2AB | 18112 | 54559;54560;54561 | chr2:178592862;178592861;178592860 | chr2:179457589;179457588;179457587 |
N2A | 17185 | 51778;51779;51780 | chr2:178592862;178592861;178592860 | chr2:179457589;179457588;179457587 |
N2B | 10688 | 32287;32288;32289 | chr2:178592862;178592861;178592860 | chr2:179457589;179457588;179457587 |
Novex-1 | 10813 | 32662;32663;32664 | chr2:178592862;178592861;178592860 | chr2:179457589;179457588;179457587 |
Novex-2 | 10880 | 32863;32864;32865 | chr2:178592862;178592861;178592860 | chr2:179457589;179457588;179457587 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs755651839 | -1.391 | 0.265 | D | 0.74 | 0.711 | 0.877242521546 | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 1.23987E-04 | 5.66E-05 | None | 0 | 0 | None | 0 | None | 0 | 7.82E-06 | 0 |
Y/C | rs755651839 | -1.391 | 0.265 | D | 0.74 | 0.711 | 0.877242521546 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs755651839 | -1.391 | 0.265 | D | 0.74 | 0.711 | 0.877242521546 | gnomAD-4.0.0 | 8.05749E-06 | None | None | None | None | N | None | 5.34031E-05 | 3.33522E-05 | None | 0 | 2.23184E-05 | None | 0 | 0 | 5.08639E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9788 | likely_pathogenic | 0.9728 | pathogenic | -2.997 | Highly Destabilizing | 0.985 | D | 0.826 | deleterious | None | None | None | None | N |
Y/C | 0.6504 | likely_pathogenic | 0.5846 | pathogenic | -1.541 | Destabilizing | 0.265 | N | 0.74 | deleterious | D | 0.621395342 | None | None | N |
Y/D | 0.9901 | likely_pathogenic | 0.988 | pathogenic | -3.725 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | D | 0.674793212 | None | None | N |
Y/E | 0.9951 | likely_pathogenic | 0.9946 | pathogenic | -3.502 | Highly Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
Y/F | 0.2124 | likely_benign | 0.1906 | benign | -1.202 | Destabilizing | 0.135 | N | 0.497 | neutral | D | 0.576628643 | None | None | N |
Y/G | 0.9592 | likely_pathogenic | 0.9548 | pathogenic | -3.405 | Highly Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
Y/H | 0.9087 | likely_pathogenic | 0.901 | pathogenic | -2.415 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | D | 0.642522325 | None | None | N |
Y/I | 0.9526 | likely_pathogenic | 0.9385 | pathogenic | -1.618 | Destabilizing | 0.996 | D | 0.814 | deleterious | None | None | None | None | N |
Y/K | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -2.345 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
Y/L | 0.885 | likely_pathogenic | 0.8587 | pathogenic | -1.618 | Destabilizing | 0.971 | D | 0.774 | deleterious | None | None | None | None | N |
Y/M | 0.9615 | likely_pathogenic | 0.9468 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Y/N | 0.9462 | likely_pathogenic | 0.9354 | pathogenic | -3.247 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | D | 0.674591408 | None | None | N |
Y/P | 0.9969 | likely_pathogenic | 0.9971 | pathogenic | -2.096 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
Y/Q | 0.991 | likely_pathogenic | 0.9894 | pathogenic | -2.916 | Highly Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
Y/R | 0.9824 | likely_pathogenic | 0.9806 | pathogenic | -2.308 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
Y/S | 0.9435 | likely_pathogenic | 0.932 | pathogenic | -3.441 | Highly Destabilizing | 0.997 | D | 0.842 | deleterious | D | 0.674793212 | None | None | N |
Y/T | 0.9846 | likely_pathogenic | 0.9802 | pathogenic | -3.093 | Highly Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
Y/V | 0.8817 | likely_pathogenic | 0.8562 | pathogenic | -2.096 | Highly Destabilizing | 0.985 | D | 0.808 | deleterious | None | None | None | None | N |
Y/W | 0.5863 | likely_pathogenic | 0.59 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.