Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19758 | 59497;59498;59499 | chr2:178592847;178592846;178592845 | chr2:179457574;179457573;179457572 |
N2AB | 18117 | 54574;54575;54576 | chr2:178592847;178592846;178592845 | chr2:179457574;179457573;179457572 |
N2A | 17190 | 51793;51794;51795 | chr2:178592847;178592846;178592845 | chr2:179457574;179457573;179457572 |
N2B | 10693 | 32302;32303;32304 | chr2:178592847;178592846;178592845 | chr2:179457574;179457573;179457572 |
Novex-1 | 10818 | 32677;32678;32679 | chr2:178592847;178592846;178592845 | chr2:179457574;179457573;179457572 |
Novex-2 | 10885 | 32878;32879;32880 | chr2:178592847;178592846;178592845 | chr2:179457574;179457573;179457572 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.012 | N | 0.667 | 0.117 | 0.27479166964 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1823 | likely_benign | 0.1571 | benign | -3.056 | Highly Destabilizing | 0.016 | N | 0.653 | neutral | None | None | None | None | N |
L/C | 0.2738 | likely_benign | 0.2754 | benign | -2.356 | Highly Destabilizing | 0.628 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/D | 0.8142 | likely_pathogenic | 0.7651 | pathogenic | -3.542 | Highly Destabilizing | 0.072 | N | 0.741 | deleterious | None | None | None | None | N |
L/E | 0.4275 | ambiguous | 0.362 | ambiguous | -3.358 | Highly Destabilizing | 0.038 | N | 0.723 | prob.delet. | None | None | None | None | N |
L/F | 0.1115 | likely_benign | 0.1061 | benign | -1.721 | Destabilizing | None | N | 0.426 | neutral | N | 0.39263229 | None | None | N |
L/G | 0.5106 | ambiguous | 0.464 | ambiguous | -3.515 | Highly Destabilizing | 0.072 | N | 0.721 | prob.delet. | None | None | None | None | N |
L/H | 0.1688 | likely_benign | 0.1544 | benign | -2.689 | Highly Destabilizing | 0.356 | N | 0.746 | deleterious | None | None | None | None | N |
L/I | 0.0948 | likely_benign | 0.0799 | benign | -1.717 | Destabilizing | None | N | 0.275 | neutral | N | 0.353863258 | None | None | N |
L/K | 0.1396 | likely_benign | 0.1253 | benign | -2.381 | Highly Destabilizing | None | N | 0.493 | neutral | None | None | None | None | N |
L/M | 0.0645 | likely_benign | 0.064 | benign | -1.765 | Destabilizing | None | N | 0.245 | neutral | None | None | None | None | N |
L/N | 0.404 | ambiguous | 0.3708 | ambiguous | -2.661 | Highly Destabilizing | 0.072 | N | 0.736 | prob.delet. | None | None | None | None | N |
L/P | 0.9712 | likely_pathogenic | 0.9522 | pathogenic | -2.15 | Highly Destabilizing | 0.356 | N | 0.757 | deleterious | None | None | None | None | N |
L/Q | 0.1242 | likely_benign | 0.1093 | benign | -2.601 | Highly Destabilizing | 0.072 | N | 0.734 | prob.delet. | None | None | None | None | N |
L/R | 0.1245 | likely_benign | 0.1076 | benign | -1.89 | Destabilizing | None | N | 0.646 | neutral | None | None | None | None | N |
L/S | 0.1814 | likely_benign | 0.1553 | benign | -3.266 | Highly Destabilizing | 0.012 | N | 0.667 | neutral | N | 0.398307469 | None | None | N |
L/T | 0.1136 | likely_benign | 0.1062 | benign | -2.969 | Highly Destabilizing | 0.001 | N | 0.488 | neutral | None | None | None | None | N |
L/V | 0.0787 | likely_benign | 0.074 | benign | -2.15 | Highly Destabilizing | 0.002 | N | 0.437 | neutral | N | 0.407214953 | None | None | N |
L/W | 0.2276 | likely_benign | 0.1998 | benign | -2.034 | Highly Destabilizing | 0.676 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/Y | 0.262 | likely_benign | 0.2596 | benign | -1.926 | Destabilizing | 0.001 | N | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.