Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19775 | 59548;59549;59550 | chr2:178592796;178592795;178592794 | chr2:179457523;179457522;179457521 |
N2AB | 18134 | 54625;54626;54627 | chr2:178592796;178592795;178592794 | chr2:179457523;179457522;179457521 |
N2A | 17207 | 51844;51845;51846 | chr2:178592796;178592795;178592794 | chr2:179457523;179457522;179457521 |
N2B | 10710 | 32353;32354;32355 | chr2:178592796;178592795;178592794 | chr2:179457523;179457522;179457521 |
Novex-1 | 10835 | 32728;32729;32730 | chr2:178592796;178592795;178592794 | chr2:179457523;179457522;179457521 |
Novex-2 | 10902 | 32929;32930;32931 | chr2:178592796;178592795;178592794 | chr2:179457523;179457522;179457521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs2050514835 | None | 0.999 | D | 0.829 | 0.493 | 0.862613207292 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/D | rs2050514835 | None | 0.999 | D | 0.829 | 0.493 | 0.862613207292 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5028 | ambiguous | 0.4778 | ambiguous | -1.617 | Destabilizing | 0.988 | D | 0.529 | neutral | N | 0.514383329 | None | None | N |
V/C | 0.8152 | likely_pathogenic | 0.7891 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
V/D | 0.9217 | likely_pathogenic | 0.8997 | pathogenic | -2.042 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | D | 0.527767551 | None | None | N |
V/E | 0.7854 | likely_pathogenic | 0.7518 | pathogenic | -1.855 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
V/F | 0.317 | likely_benign | 0.3164 | benign | -0.963 | Destabilizing | 0.997 | D | 0.784 | deleterious | N | 0.500002057 | None | None | N |
V/G | 0.705 | likely_pathogenic | 0.654 | pathogenic | -2.098 | Highly Destabilizing | 0.999 | D | 0.822 | deleterious | D | 0.527260572 | None | None | N |
V/H | 0.8582 | likely_pathogenic | 0.8415 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/I | 0.0755 | likely_benign | 0.0763 | benign | -0.306 | Destabilizing | 0.355 | N | 0.206 | neutral | N | 0.484782808 | None | None | N |
V/K | 0.7633 | likely_pathogenic | 0.7195 | pathogenic | -1.416 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
V/L | 0.2632 | likely_benign | 0.2526 | benign | -0.306 | Destabilizing | 0.894 | D | 0.443 | neutral | N | 0.486617836 | None | None | N |
V/M | 0.2567 | likely_benign | 0.2386 | benign | -0.268 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/N | 0.8071 | likely_pathogenic | 0.7673 | pathogenic | -1.684 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.932 | likely_pathogenic | 0.9229 | pathogenic | -0.714 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
V/Q | 0.7098 | likely_pathogenic | 0.6779 | pathogenic | -1.572 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/R | 0.7134 | likely_pathogenic | 0.6753 | pathogenic | -1.217 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
V/S | 0.6949 | likely_pathogenic | 0.6677 | pathogenic | -2.246 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
V/T | 0.4657 | ambiguous | 0.4389 | ambiguous | -1.917 | Destabilizing | 0.991 | D | 0.649 | prob.neutral | None | None | None | None | N |
V/W | 0.9354 | likely_pathogenic | 0.9301 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/Y | 0.7851 | likely_pathogenic | 0.7795 | pathogenic | -0.981 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.